RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 KRTAP4-4Q9BYR3 166 aa4.63□□□□□ -1.67
CBWD3-206ENST00000478048 KMT2DO14686 5537 aa4.62□□□□□ -1.67
CBWD3-206ENST00000478048 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
CBWD3-206ENST00000478048 CDC42SE1Q9NRR8 79 aa4.57□□□□□ -1.68
CBWD3-206ENST00000478048 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CBWD3-206ENST00000478048 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
CBWD3-206ENST00000478048 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CBWD3-206ENST00000478048 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
CBWD3-206ENST00000478048 K7ERS5 55 aa4.46□□□□□ -1.69
CBWD3-206ENST00000478048 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
CBWD3-206ENST00000478048 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
CBWD3-206ENST00000478048 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
CBWD3-206ENST00000478048 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
CBWD3-206ENST00000478048 TNP1P09430 55 aa4.39□□□□□ -1.71
CBWD3-206ENST00000478048 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
CBWD3-206ENST00000478048 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
CBWD3-206ENST00000478048 NEBP20929 6669 aa4.33□□□□□ -1.72
CBWD3-206ENST00000478048 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
CBWD3-206ENST00000478048 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
CBWD3-206ENST00000478048 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
CBWD3-206ENST00000478048 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
CBWD3-206ENST00000478048 SPRR2EP22531 72 aa4.25□□□□□ -1.73
CBWD3-206ENST00000478048 SPRR2BP35325 72 aa4.25□□□□□ -1.73
CBWD3-206ENST00000478048 SPRR2AP35326 72 aa4.25□□□□□ -1.73
CBWD3-206ENST00000478048 ROMO1P60602 79 aa4.25□□□□□ -1.73
CBWD3-206ENST00000478048 MT1EP04732 61 aa4.23□□□□□ -1.73
CBWD3-206ENST00000478048 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
CBWD3-206ENST00000478048 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
CBWD3-206ENST00000478048 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
CBWD3-206ENST00000478048 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
CBWD3-206ENST00000478048 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
CBWD3-206ENST00000478048 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
CBWD3-206ENST00000478048 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
CBWD3-206ENST00000478048 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
CBWD3-206ENST00000478048 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
CBWD3-206ENST00000478048 SPRR2DP22532 72 aa4.09□□□□□ -1.75
CBWD3-206ENST00000478048 MT1LQ93083 61 aa4.09□□□□□ -1.75
CBWD3-206ENST00000478048 MT1GP13640 62 aa4.04□□□□□ -1.76
CBWD3-206ENST00000478048 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
CBWD3-206ENST00000478048 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
CBWD3-206ENST00000478048 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
CBWD3-206ENST00000478048 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
CBWD3-206ENST00000478048 MT1MQ8N339 61 aa4.01□□□□□ -1.77
CBWD3-206ENST00000478048 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
CBWD3-206ENST00000478048 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
CBWD3-206ENST00000478048 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
CBWD3-206ENST00000478048 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.8
CBWD3-206ENST00000478048 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
CBWD3-206ENST00000478048 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
CBWD3-206ENST00000478048 MT4P47944 62 aa3.58□□□□□ -1.84
CBWD3-206ENST00000478048 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
CBWD3-206ENST00000478048 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
CBWD3-206ENST00000478048 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
CBWD3-206ENST00000478048 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
CBWD3-206ENST00000478048 MT1AP04731 61 aa3.47□□□□□ -1.85
CBWD3-206ENST00000478048 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
CBWD3-206ENST00000478048 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
CBWD3-206ENST00000478048 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
CBWD3-206ENST00000478048 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
CBWD3-206ENST00000478048 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
CBWD3-206ENST00000478048 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
CBWD3-206ENST00000478048 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
CBWD3-206ENST00000478048 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
CBWD3-206ENST00000478048 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
CBWD3-206ENST00000478048 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
CBWD3-206ENST00000478048 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
CBWD3-206ENST00000478048 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
CBWD3-206ENST00000478048 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CBWD3-206ENST00000478048 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
CBWD3-206ENST00000478048 INE1O15225 51 aa2.69□□□□□ -1.98
CBWD3-206ENST00000478048 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
CBWD3-206ENST00000478048 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
CBWD3-206ENST00000478048 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
CBWD3-206ENST00000478048 PRM1P04553 51 aa2.21□□□□□ -2.06
CBWD3-206ENST00000478048 PHGR1C9JFL3 82 aa2.03□□□□□ -2.09
CBWD3-206ENST00000478048 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
CBWD3-206ENST00000478048 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms