RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 H7BZZ5 65 aa3.22□□□□□ -1.89
ERCC8-205ENST00000477893 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
ERCC8-205ENST00000477893 A0A1B0GU33 70 aa3.19□□□□□ -1.9
ERCC8-205ENST00000477893 ANAPC13Q9BS18 74 aa3.19□□□□□ -1.9
ERCC8-205ENST00000477893 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
ERCC8-205ENST00000477893 A0A1B0GU69 56 aa3.15□□□□□ -1.91
ERCC8-205ENST00000477893 A8MU10 97 aa3.13□□□□□ -1.91
ERCC8-205ENST00000477893 CCDC179H3BU77 68 aa3.13□□□□□ -1.91
ERCC8-205ENST00000477893 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
ERCC8-205ENST00000477893 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
ERCC8-205ENST00000477893 SMIM26A0A096LP01 95 aa3.09□□□□□ -1.91
ERCC8-205ENST00000477893 MT1EP04732 61 aa3.09□□□□□ -1.91
ERCC8-205ENST00000477893 PCP4P48539 62 aa3.09□□□□□ -1.91
ERCC8-205ENST00000477893 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
ERCC8-205ENST00000477893 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
ERCC8-205ENST00000477893 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
ERCC8-205ENST00000477893 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
ERCC8-205ENST00000477893 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
ERCC8-205ENST00000477893 ATP5EP56381 51 aaPredicted RBP3.04□□□□□ -1.92
ERCC8-205ENST00000477893 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
ERCC8-205ENST00000477893 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
ERCC8-205ENST00000477893 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
ERCC8-205ENST00000477893 TNP1P09430 55 aa2.98□□□□□ -1.93
ERCC8-205ENST00000477893 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
ERCC8-205ENST00000477893 TMEM258P61165 79 aa2.97□□□□□ -1.93
ERCC8-205ENST00000477893 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
ERCC8-205ENST00000477893 MT1GP13640 62 aa2.95□□□□□ -1.94
ERCC8-205ENST00000477893 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
ERCC8-205ENST00000477893 MT1LQ93083 61 aa2.95□□□□□ -1.94
ERCC8-205ENST00000477893 MT1MQ8N339 61 aa2.94□□□□□ -1.94
ERCC8-205ENST00000477893 UQCR11O14957 56 aa2.92□□□□□ -1.94
ERCC8-205ENST00000477893 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
ERCC8-205ENST00000477893 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
ERCC8-205ENST00000477893 PSPHP1O15172 72 aa2.87□□□□□ -1.95
ERCC8-205ENST00000477893 MT4P47944 62 aa2.87□□□□□ -1.95
ERCC8-205ENST00000477893 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
ERCC8-205ENST00000477893 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
ERCC8-205ENST00000477893 K7ERS5 55 aa2.83□□□□□ -1.96
ERCC8-205ENST00000477893 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
ERCC8-205ENST00000477893 V9GYY9 64 aa2.79□□□□□ -1.96
ERCC8-205ENST00000477893 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
ERCC8-205ENST00000477893 Q1T7F1 81 aa2.77□□□□□ -1.97
ERCC8-205ENST00000477893 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
ERCC8-205ENST00000477893 A6NED7 52 aa2.76□□□□□ -1.97
ERCC8-205ENST00000477893 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
ERCC8-205ENST00000477893 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
ERCC8-205ENST00000477893 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
ERCC8-205ENST00000477893 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
ERCC8-205ENST00000477893 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
ERCC8-205ENST00000477893 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
ERCC8-205ENST00000477893 ROMO1P60602 79 aa2.63□□□□□ -1.99
ERCC8-205ENST00000477893 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
ERCC8-205ENST00000477893 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
ERCC8-205ENST00000477893 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
ERCC8-205ENST00000477893 RPS28P62857 69 aaKnown RBP2.58□□□□□ -2
ERCC8-205ENST00000477893 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
ERCC8-205ENST00000477893 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
ERCC8-205ENST00000477893 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
ERCC8-205ENST00000477893 MT1AP04731 61 aa2.49□□□□□ -2.01
ERCC8-205ENST00000477893 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
ERCC8-205ENST00000477893 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
ERCC8-205ENST00000477893 BRK1Q8WUW1 75 aa2.37□□□□□ -2.03
ERCC8-205ENST00000477893 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
ERCC8-205ENST00000477893 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
ERCC8-205ENST00000477893 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
ERCC8-205ENST00000477893 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
ERCC8-205ENST00000477893 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
ERCC8-205ENST00000477893 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
ERCC8-205ENST00000477893 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
ERCC8-205ENST00000477893 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
ERCC8-205ENST00000477893 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
ERCC8-205ENST00000477893 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
ERCC8-205ENST00000477893 LUZP6Q538Z0 58 aa1.82□□□□□ -2.12
ERCC8-205ENST00000477893 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
ERCC8-205ENST00000477893 INE1O15225 51 aa1.46□□□□□ -2.18
ERCC8-205ENST00000477893 PRM1P04553 51 aa1.37□□□□□ -2.19
ERCC8-205ENST00000477893 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
ERCC8-205ENST00000477893 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms