RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TMEM258P61165 79 aa2.53□□□□□ -2
SPTLC1-205ENST00000477888 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
SPTLC1-205ENST00000477888 ACYP1P07311 99 aa2.52□□□□□ -2.01
SPTLC1-205ENST00000477888 TRAV22A0A0B4J277 110 aa2.49□□□□□ -2.01
SPTLC1-205ENST00000477888 LOC101927531A0A1B0GV80 90 aa2.49□□□□□ -2.01
SPTLC1-205ENST00000477888 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SPTLC1-205ENST00000477888 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
SPTLC1-205ENST00000477888 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
SPTLC1-205ENST00000477888 MT-ATP8P03928 68 aa2.47□□□□□ -2.01
SPTLC1-205ENST00000477888 A0A1W2PPM0 123 aa2.46□□□□□ -2.02
SPTLC1-205ENST00000477888 PYY3Q5JQD4 70 aa2.46□□□□□ -2.02
SPTLC1-205ENST00000477888 COL5A1-AS1Q5SY13 56 aa2.46□□□□□ -2.02
SPTLC1-205ENST00000477888 A0A0D9SG42 100 aa2.44□□□□□ -2.02
SPTLC1-205ENST00000477888 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
SPTLC1-205ENST00000477888 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
SPTLC1-205ENST00000477888 J3QR89 54 aa2.4□□□□□ -2.03
SPTLC1-205ENST00000477888 GTF2H5Q6ZYL4 71 aa2.4□□□□□ -2.03
SPTLC1-205ENST00000477888 PRO0461Q9UI25 63 aa2.4□□□□□ -2.03
SPTLC1-205ENST00000477888 UBL5Q9BZL1 73 aa2.39□□□□□ -2.03
SPTLC1-205ENST00000477888 CCDC179H3BU77 68 aa2.38□□□□□ -2.03
SPTLC1-205ENST00000477888 UQCR10Q9UDW1 63 aa2.37□□□□□ -2.03
SPTLC1-205ENST00000477888 SPCS1Q9Y6A9 102 aa2.37□□□□□ -2.03
SPTLC1-205ENST00000477888 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
SPTLC1-205ENST00000477888 ATOX1O00244 68 aa2.35□□□□□ -2.03
SPTLC1-205ENST00000477888 UQCRQO14949 82 aa2.35□□□□□ -2.03
SPTLC1-205ENST00000477888 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SPTLC1-205ENST00000477888 ROMO1P60602 79 aa2.34□□□□□ -2.03
SPTLC1-205ENST00000477888 H0Y9P7 68 aa2.33□□□□□ -2.04
SPTLC1-205ENST00000477888 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
SPTLC1-205ENST00000477888 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
SPTLC1-205ENST00000477888 Q1T7F1 81 aa2.3□□□□□ -2.04
SPTLC1-205ENST00000477888 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
SPTLC1-205ENST00000477888 DMAC1Q96GE9 116 aa2.28□□□□□ -2.04
SPTLC1-205ENST00000477888 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
SPTLC1-205ENST00000477888 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
SPTLC1-205ENST00000477888 SERP1Q9Y6X1 66 aa2.25□□□□□ -2.05
SPTLC1-205ENST00000477888 COA5Q86WW8 74 aa2.23□□□□□ -2.05
SPTLC1-205ENST00000477888 F8W1H4 67 aa2.22□□□□□ -2.05
SPTLC1-205ENST00000477888 COX7CP15954 63 aa2.21□□□□□ -2.06
SPTLC1-205ENST00000477888 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
SPTLC1-205ENST00000477888 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
SPTLC1-205ENST00000477888 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
SPTLC1-205ENST00000477888 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
SPTLC1-205ENST00000477888 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
SPTLC1-205ENST00000477888 ATP5EP56381 51 aaPredicted RBP2.16□□□□□ -2.06
SPTLC1-205ENST00000477888 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
SPTLC1-205ENST00000477888 SPTSSBQ8NFR3 76 aa2.16□□□□□ -2.06
SPTLC1-205ENST00000477888 MT1AP04731 61 aa2.15□□□□□ -2.07
SPTLC1-205ENST00000477888 ETDBQ3ZM63 59 aa2.15□□□□□ -2.07
SPTLC1-205ENST00000477888 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
SPTLC1-205ENST00000477888 CDC42SE1Q9NRR8 79 aa2.15□□□□□ -2.07
SPTLC1-205ENST00000477888 ACYP2P14621 99 aa2.13□□□□□ -2.07
SPTLC1-205ENST00000477888 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
SPTLC1-205ENST00000477888 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
SPTLC1-205ENST00000477888 TNP1P09430 55 aa2.1□□□□□ -2.07
SPTLC1-205ENST00000477888 SERP2Q8N6R1 65 aa2.1□□□□□ -2.07
SPTLC1-205ENST00000477888 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
SPTLC1-205ENST00000477888 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SPTLC1-205ENST00000477888 KRTAP9-6A8MVA2 160 aa2.07□□□□□ -2.08
SPTLC1-205ENST00000477888 ATP5EP2Q5VTU8 51 aa2.07□□□□□ -2.08
SPTLC1-205ENST00000477888 SPATA8Q6RVD6 105 aa2.06□□□□□ -2.08
SPTLC1-205ENST00000477888 CHKB-CPT1BH3BT56 60 aa2.05□□□□□ -2.08
SPTLC1-205ENST00000477888 H7BZZ5 65 aa2.05□□□□□ -2.08
SPTLC1-205ENST00000477888 INE1O15225 51 aa2.05□□□□□ -2.08
SPTLC1-205ENST00000477888 LINC00643Q86TS7 51 aa2.04□□□□□ -2.08
SPTLC1-205ENST00000477888 PRR15LQ9BU68 103 aa1.86□□□□□ -2.11
SPTLC1-205ENST00000477888 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
SPTLC1-205ENST00000477888 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
SPTLC1-205ENST00000477888 LINC01558Q9Y6Z2 57 aa1.8□□□□□ -2.12
SPTLC1-205ENST00000477888 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SPTLC1-205ENST00000477888 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SPTLC1-205ENST00000477888 UQCR11O14957 56 aa1.75□□□□□ -2.13
SPTLC1-205ENST00000477888 A0A1B0GU69 56 aa1.69□□□□□ -2.14
SPTLC1-205ENST00000477888 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SPTLC1-205ENST00000477888 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
SPTLC1-205ENST00000477888 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
SPTLC1-205ENST00000477888 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
SPTLC1-205ENST00000477888 PRM1P04553 51 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 151.8 ms