RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
HDLBP-236ENST00000477477 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
HDLBP-236ENST00000477477 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
HDLBP-236ENST00000477477 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
HDLBP-236ENST00000477477 MT1EP04732 61 aa4.25□□□□□ -1.73
HDLBP-236ENST00000477477 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
HDLBP-236ENST00000477477 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
HDLBP-236ENST00000477477 A0A0D9SG42 100 aa4.14□□□□□ -1.75
HDLBP-236ENST00000477477 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
HDLBP-236ENST00000477477 MT1GP13640 62 aa4.12□□□□□ -1.75
HDLBP-236ENST00000477477 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
HDLBP-236ENST00000477477 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
HDLBP-236ENST00000477477 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
HDLBP-236ENST00000477477 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
HDLBP-236ENST00000477477 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
HDLBP-236ENST00000477477 A0A1B0GU33 70 aa4.08□□□□□ -1.76
HDLBP-236ENST00000477477 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
HDLBP-236ENST00000477477 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
HDLBP-236ENST00000477477 MT1MQ8N339 61 aa4.06□□□□□ -1.76
HDLBP-236ENST00000477477 MT4P47944 62 aa4.04□□□□□ -1.76
HDLBP-236ENST00000477477 MT1LQ93083 61 aa4.04□□□□□ -1.76
HDLBP-236ENST00000477477 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
HDLBP-236ENST00000477477 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
HDLBP-236ENST00000477477 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
HDLBP-236ENST00000477477 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
HDLBP-236ENST00000477477 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
HDLBP-236ENST00000477477 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
HDLBP-236ENST00000477477 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
HDLBP-236ENST00000477477 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
HDLBP-236ENST00000477477 TNP1P09430 55 aa3.91□□□□□ -1.78
HDLBP-236ENST00000477477 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
HDLBP-236ENST00000477477 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
HDLBP-236ENST00000477477 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
HDLBP-236ENST00000477477 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
HDLBP-236ENST00000477477 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
HDLBP-236ENST00000477477 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
HDLBP-236ENST00000477477 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
HDLBP-236ENST00000477477 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
HDLBP-236ENST00000477477 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
HDLBP-236ENST00000477477 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
HDLBP-236ENST00000477477 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
HDLBP-236ENST00000477477 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
HDLBP-236ENST00000477477 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
HDLBP-236ENST00000477477 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
HDLBP-236ENST00000477477 INE1O15225 51 aa3.51□□□□□ -1.85
HDLBP-236ENST00000477477 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
HDLBP-236ENST00000477477 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
HDLBP-236ENST00000477477 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
HDLBP-236ENST00000477477 MT1AP04731 61 aa3.43□□□□□ -1.86
HDLBP-236ENST00000477477 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
HDLBP-236ENST00000477477 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
HDLBP-236ENST00000477477 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
HDLBP-236ENST00000477477 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
HDLBP-236ENST00000477477 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
HDLBP-236ENST00000477477 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
HDLBP-236ENST00000477477 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
HDLBP-236ENST00000477477 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
HDLBP-236ENST00000477477 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
HDLBP-236ENST00000477477 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
HDLBP-236ENST00000477477 MT3P25713 68 aa3.14□□□□□ -1.91
HDLBP-236ENST00000477477 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
HDLBP-236ENST00000477477 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
HDLBP-236ENST00000477477 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
HDLBP-236ENST00000477477 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
HDLBP-236ENST00000477477 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
HDLBP-236ENST00000477477 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
HDLBP-236ENST00000477477 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
HDLBP-236ENST00000477477 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
HDLBP-236ENST00000477477 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
HDLBP-236ENST00000477477 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
HDLBP-236ENST00000477477 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
HDLBP-236ENST00000477477 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
HDLBP-236ENST00000477477 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
HDLBP-236ENST00000477477 PRM1P04553 51 aa2.09□□□□□ -2.07
HDLBP-236ENST00000477477 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
HDLBP-236ENST00000477477 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
HDLBP-236ENST00000477477 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
HDLBP-236ENST00000477477 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 75.1 ms