RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
COL4A5-204ENST00000477429 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
COL4A5-204ENST00000477429 A0A0D9SG42 100 aa3.39□□□□□ -1.87
COL4A5-204ENST00000477429 K7ERU9 68 aa3.39□□□□□ -1.87
COL4A5-204ENST00000477429 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
COL4A5-204ENST00000477429 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
COL4A5-204ENST00000477429 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
COL4A5-204ENST00000477429 MP68P56378 58 aa3.36□□□□□ -1.87
COL4A5-204ENST00000477429 F8W1H4 67 aa3.35□□□□□ -1.87
COL4A5-204ENST00000477429 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
COL4A5-204ENST00000477429 COL5A1-AS1Q5SY13 56 aa3.35□□□□□ -1.87
COL4A5-204ENST00000477429 ATP5EP2Q5VTU8 51 aa3.35□□□□□ -1.87
COL4A5-204ENST00000477429 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
COL4A5-204ENST00000477429 TRAV7A0A075B6U4 112 aa3.32□□□□□ -1.88
COL4A5-204ENST00000477429 A8MU10 97 aa3.32□□□□□ -1.88
COL4A5-204ENST00000477429 ANAPC13Q9BS18 74 aa3.3□□□□□ -1.88
COL4A5-204ENST00000477429 GTF2H5Q6ZYL4 71 aa3.29□□□□□ -1.88
COL4A5-204ENST00000477429 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
COL4A5-204ENST00000477429 H3BPC8 53 aa3.26□□□□□ -1.89
COL4A5-204ENST00000477429 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
COL4A5-204ENST00000477429 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
COL4A5-204ENST00000477429 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
COL4A5-204ENST00000477429 ACYP2P14621 99 aa3.24□□□□□ -1.89
COL4A5-204ENST00000477429 LINC00643Q86TS7 51 aa3.24□□□□□ -1.89
COL4A5-204ENST00000477429 J3QR89 54 aa3.21□□□□□ -1.9
COL4A5-204ENST00000477429 SPTSSBQ8NFR3 76 aa3.2□□□□□ -1.9
COL4A5-204ENST00000477429 KRTAP12-1P59990 96 aa3.18□□□□□ -1.9
COL4A5-204ENST00000477429 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
COL4A5-204ENST00000477429 CHKB-CPT1BH3BT56 60 aa3.17□□□□□ -1.9
COL4A5-204ENST00000477429 SPATA8Q6RVD6 105 aa3.17□□□□□ -1.9
COL4A5-204ENST00000477429 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
COL4A5-204ENST00000477429 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
COL4A5-204ENST00000477429 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
COL4A5-204ENST00000477429 K7ERS5 55 aa3.13□□□□□ -1.91
COL4A5-204ENST00000477429 CCDC179H3BU77 68 aa3.1□□□□□ -1.91
COL4A5-204ENST00000477429 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
COL4A5-204ENST00000477429 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
COL4A5-204ENST00000477429 A6NED7 52 aa3.07□□□□□ -1.92
COL4A5-204ENST00000477429 TMEM258P61165 79 aa3.07□□□□□ -1.92
COL4A5-204ENST00000477429 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
COL4A5-204ENST00000477429 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
COL4A5-204ENST00000477429 SNURFQ9Y675 71 aa3.04□□□□□ -1.92
COL4A5-204ENST00000477429 TNP1P09430 55 aa3.01□□□□□ -1.93
COL4A5-204ENST00000477429 A0A1B0GU33 70 aa3□□□□□ -1.93
COL4A5-204ENST00000477429 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
COL4A5-204ENST00000477429 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
COL4A5-204ENST00000477429 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
COL4A5-204ENST00000477429 COA5Q86WW8 74 aa2.96□□□□□ -1.94
COL4A5-204ENST00000477429 SERP1Q9Y6X1 66 aa2.96□□□□□ -1.94
COL4A5-204ENST00000477429 MT1AP04731 61 aa2.89□□□□□ -1.95
COL4A5-204ENST00000477429 COX7CP15954 63 aa2.89□□□□□ -1.95
COL4A5-204ENST00000477429 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
COL4A5-204ENST00000477429 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
COL4A5-204ENST00000477429 ATP5EP56381 51 aaPredicted RBP2.85□□□□□ -1.95
COL4A5-204ENST00000477429 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
COL4A5-204ENST00000477429 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
COL4A5-204ENST00000477429 A0A1B0GU69 56 aa2.76□□□□□ -1.97
COL4A5-204ENST00000477429 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
COL4A5-204ENST00000477429 ROMO1P60602 79 aa2.75□□□□□ -1.97
COL4A5-204ENST00000477429 Q1T7F1 81 aa2.75□□□□□ -1.97
COL4A5-204ENST00000477429 SERP2Q8N6R1 65 aa2.75□□□□□ -1.97
COL4A5-204ENST00000477429 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
COL4A5-204ENST00000477429 H7BZZ5 65 aa2.66□□□□□ -1.98
COL4A5-204ENST00000477429 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
COL4A5-204ENST00000477429 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
COL4A5-204ENST00000477429 PHGR1C9JFL3 82 aa2.57□□□□□ -2
COL4A5-204ENST00000477429 PRR15LQ9BU68 103 aa2.51□□□□□ -2.01
COL4A5-204ENST00000477429 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
COL4A5-204ENST00000477429 UQCR11O14957 56 aa2.44□□□□□ -2.02
COL4A5-204ENST00000477429 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
COL4A5-204ENST00000477429 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
COL4A5-204ENST00000477429 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
COL4A5-204ENST00000477429 INE1O15225 51 aa2.27□□□□□ -2.05
COL4A5-204ENST00000477429 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
COL4A5-204ENST00000477429 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
COL4A5-204ENST00000477429 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
COL4A5-204ENST00000477429 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
COL4A5-204ENST00000477429 PRM1P04553 51 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms