RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MACF1Q9UPN3 7388 aaKnown RBP0.65□□□□□ -2.31
XRN1-211ENST00000477237 MTORP42345 2549 aa0.65□□□□□ -2.31
XRN1-211ENST00000477237 DEFB4AO15263 64 aa0.65□□□□□ -2.31
XRN1-211ENST00000477237 ACACBO00763 2458 aa0.65□□□□□ -2.31
XRN1-211ENST00000477237 FLNAP21333 2647 aaKnown RBP0.65□□□□□ -2.31
XRN1-211ENST00000477237 DOPEY1Q5JWR5 2465 aa0.64□□□□□ -2.31
XRN1-211ENST00000477237 NOTCH1P46531 2555 aa0.64□□□□□ -2.31
XRN1-211ENST00000477237 SMR3BP02814 79 aaPredicted RBP0.64□□□□□ -2.31
XRN1-211ENST00000477237 CDH23Q9H251 3354 aa0.64□□□□□ -2.31
XRN1-211ENST00000477237 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
XRN1-211ENST00000477237 CEP295Q9C0D2 2601 aa0.63□□□□□ -2.31
XRN1-211ENST00000477237 ZFYVE26Q68DK2 2539 aa0.63□□□□□ -2.31
XRN1-211ENST00000477237 KRTAP19-5Q3LI72 72 aa0.63□□□□□ -2.31
XRN1-211ENST00000477237 TLN2Q9Y4G6 2542 aa0.63□□□□□ -2.31
XRN1-211ENST00000477237 MYO18BQ8IUG5 2567 aa0.62□□□□□ -2.31
XRN1-211ENST00000477237 MGAM2Q2M2H8 2515 aa0.62□□□□□ -2.31
XRN1-211ENST00000477237 FLNBO75369 2602 aaKnown RBP0.62□□□□□ -2.31
XRN1-211ENST00000477237 SPTAN1Q13813 2472 aaKnown RBP0.61□□□□□ -2.31
XRN1-211ENST00000477237 FASNP49327 2511 aaKnown RBP0.59□□□□□ -2.32
XRN1-211ENST00000477237 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
XRN1-211ENST00000477237 MT1AP04731 61 aa0.57□□□□□ -2.32
XRN1-211ENST00000477237 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
XRN1-211ENST00000477237 MYO9AB2RTY4 2548 aa0.57□□□□□ -2.32
XRN1-211ENST00000477237 MAST4O15021 2626 aa0.56□□□□□ -2.32
XRN1-211ENST00000477237 SPRR2DP22532 72 aa0.55□□□□□ -2.32
XRN1-211ENST00000477237 IGSF10Q6WRI0 2623 aa0.55□□□□□ -2.32
XRN1-211ENST00000477237 DNHD1Q96M86 4753 aa0.55□□□□□ -2.32
XRN1-211ENST00000477237 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
XRN1-211ENST00000477237 SYNE2Q8WXH0 6885 aaKnown RBP0.54□□□□□ -2.32
XRN1-211ENST00000477237 SPRR2BP35325 72 aa0.53□□□□□ -2.32
XRN1-211ENST00000477237 SPRR2AP35326 72 aa0.52□□□□□ -2.33
XRN1-211ENST00000477237 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
XRN1-211ENST00000477237 SPRR2FQ96RM1 72 aa0.51□□□□□ -2.33
XRN1-211ENST00000477237 HMCN2Q8NDA2 5059 aa0.51□□□□□ -2.33
XRN1-211ENST00000477237 RYR3Q15413 4870 aa0.5□□□□□ -2.33
XRN1-211ENST00000477237 BIRC6Q9NR09 4857 aa0.5□□□□□ -2.33
XRN1-211ENST00000477237 SPRR2GQ9BYE4 73 aa0.5□□□□□ -2.33
XRN1-211ENST00000477237 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
XRN1-211ENST00000477237 FSIP2Q5CZC0 6907 aa0.49□□□□□ -2.33
XRN1-211ENST00000477237 MUC2Q02817 5179 aa0.49□□□□□ -2.33
XRN1-211ENST00000477237 HERC2O95714 4834 aa0.49□□□□□ -2.33
XRN1-211ENST00000477237 MT1EP04732 61 aa0.48□□□□□ -2.33
XRN1-211ENST00000477237 SPRR2EP22531 72 aa0.48□□□□□ -2.33
XRN1-211ENST00000477237 USH2AO75445 5202 aa0.48□□□□□ -2.33
XRN1-211ENST00000477237 PCLOQ9Y6V0 5065 aa0.47□□□□□ -2.33
XRN1-211ENST00000477237 HYDINQ4G0P3 5121 aa0.47□□□□□ -2.33
XRN1-211ENST00000477237 MT1XP80297 61 aa0.46□□□□□ -2.34
XRN1-211ENST00000477237 KRTAP19-2Q3LHN2 52 aa0.45□□□□□ -2.34
XRN1-211ENST00000477237 MT1LQ93083 61 aa0.45□□□□□ -2.34
XRN1-211ENST00000477237 KMT2CQ8NEZ4 4911 aaKnown RBP0.44□□□□□ -2.34
XRN1-211ENST00000477237 KRTAP19-8Q3LI54 63 aa0.44□□□□□ -2.34
XRN1-211ENST00000477237 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
XRN1-211ENST00000477237 RYR1P21817 5038 aa0.42□□□□□ -2.34
XRN1-211ENST00000477237 MT1HP80294 61 aa0.42□□□□□ -2.34
XRN1-211ENST00000477237 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
XRN1-211ENST00000477237 KRTAP19-7Q3SYF9 63 aa0.41□□□□□ -2.34
XRN1-211ENST00000477237 UBR4Q5T4S7 5183 aa0.4□□□□□ -2.34
XRN1-211ENST00000477237 KMT2DO14686 5537 aa0.4□□□□□ -2.35
XRN1-211ENST00000477237 SSPOA2VEC9 5147 aa0.4□□□□□ -2.35
XRN1-211ENST00000477237 MT1BP07438 61 aa0.39□□□□□ -2.35
XRN1-211ENST00000477237 MT1GP13640 62 aa0.36□□□□□ -2.35
XRN1-211ENST00000477237 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
XRN1-211ENST00000477237 RYR2Q92736 4967 aa0.34□□□□□ -2.36
XRN1-211ENST00000477237 EPPK1P58107 5090 aaKnown RBP0.33□□□□□ -2.36
XRN1-211ENST00000477237 MT1MQ8N339 61 aa0.32□□□□□ -2.36
XRN1-211ENST00000477237 ABCA13Q86UQ4 5058 aa0.31□□□□□ -2.36
XRN1-211ENST00000477237 MT2AP02795 61 aa0.31□□□□□ -2.36
XRN1-211ENST00000477237 KIAA1109Q2LD37 5005 aa0.31□□□□□ -2.36
XRN1-211ENST00000477237 MT1FP04733 61 aa0.29□□□□□ -2.36
XRN1-211ENST00000477237 MUC12Q9UKN1 5478 aa0.29□□□□□ -2.36
XRN1-211ENST00000477237 MT1HL1P0DM35 61 aa0.27□□□□□ -2.37
XRN1-211ENST00000477237 PHGR1C9JFL3 82 aa0.22□□□□□ -2.37
XRN1-211ENST00000477237 DSTQ03001 7570 aaKnown RBP0.16□□□□□ -2.38
XRN1-211ENST00000477237 NEBP20929 6669 aa0.07□□□□□ -2.4
XRN1-211ENST00000477237 MT4P47944 62 aa0.07□□□□□ -2.4
XRN1-211ENST00000477237 KRTAP19-6Q3LI70 58 aa0.06□□□□□ -2.4
XRN1-211ENST00000477237 KRTAP20-2Q3LI61 65 aa0.05□□□□□ -2.4
XRN1-211ENST00000477237 KRTAP20-1Q3LI63 56 aa-0.05□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 116.2 ms