RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
BRCA1-214ENST00000477152 A0A1B0GV90 55 aa2.7□□□□□ -1.98
BRCA1-214ENST00000477152 CYSTM1Q9H1C7 97 aa2.69□□□□□ -1.98
BRCA1-214ENST00000477152 MT1EP04732 61 aa2.68□□□□□ -1.98
BRCA1-214ENST00000477152 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
BRCA1-214ENST00000477152 MT1GP13640 62 aa2.67□□□□□ -1.98
BRCA1-214ENST00000477152 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
BRCA1-214ENST00000477152 SNURFQ9Y675 71 aa2.67□□□□□ -1.98
BRCA1-214ENST00000477152 A0A0D9SG42 100 aa2.66□□□□□ -1.98
BRCA1-214ENST00000477152 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
BRCA1-214ENST00000477152 K7ERU9 68 aa2.65□□□□□ -1.98
BRCA1-214ENST00000477152 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.98
BRCA1-214ENST00000477152 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
BRCA1-214ENST00000477152 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.98
BRCA1-214ENST00000477152 A0A1B0GU33 70 aa2.63□□□□□ -1.99
BRCA1-214ENST00000477152 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
BRCA1-214ENST00000477152 COA5Q86WW8 74 aa2.61□□□□□ -1.99
BRCA1-214ENST00000477152 SERP2Q8N6R1 65 aa2.61□□□□□ -1.99
BRCA1-214ENST00000477152 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
BRCA1-214ENST00000477152 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
BRCA1-214ENST00000477152 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -1.99
BRCA1-214ENST00000477152 MT4P47944 62 aa2.59□□□□□ -2
BRCA1-214ENST00000477152 SPATA8Q6RVD6 105 aa2.59□□□□□ -2
BRCA1-214ENST00000477152 TNP1P09430 55 aa2.57□□□□□ -2
BRCA1-214ENST00000477152 MT1MQ8N339 61 aa2.57□□□□□ -2
BRCA1-214ENST00000477152 KRTAP12-1P59990 96 aa2.56□□□□□ -2
BRCA1-214ENST00000477152 A0A1B0GU69 56 aa2.54□□□□□ -2
BRCA1-214ENST00000477152 MT1LQ93083 61 aa2.54□□□□□ -2
BRCA1-214ENST00000477152 C10orf95Q9H7T3 257 aa2.52□□□□□ -2.01
BRCA1-214ENST00000477152 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
BRCA1-214ENST00000477152 PRR15LQ9BU68 103 aa2.5□□□□□ -2.01
BRCA1-214ENST00000477152 COX7CP15954 63 aa2.49□□□□□ -2.01
BRCA1-214ENST00000477152 ANAPC13Q9BS18 74 aa2.49□□□□□ -2.01
BRCA1-214ENST00000477152 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
BRCA1-214ENST00000477152 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
BRCA1-214ENST00000477152 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-214ENST00000477152 H7BZZ5 65 aa2.44□□□□□ -2.02
BRCA1-214ENST00000477152 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
BRCA1-214ENST00000477152 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
BRCA1-214ENST00000477152 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
BRCA1-214ENST00000477152 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
BRCA1-214ENST00000477152 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
BRCA1-214ENST00000477152 A6NED7 52 aa2.42□□□□□ -2.02
BRCA1-214ENST00000477152 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
BRCA1-214ENST00000477152 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
BRCA1-214ENST00000477152 K7ERS5 55 aa2.41□□□□□ -2.02
BRCA1-214ENST00000477152 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
BRCA1-214ENST00000477152 ATP5EP56381 51 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-214ENST00000477152 UQCR11O14957 56 aa2.36□□□□□ -2.03
BRCA1-214ENST00000477152 LINC01558Q9Y6Z2 57 aa2.34□□□□□ -2.04
BRCA1-214ENST00000477152 MIR22HGQ0VDD5 57 aa2.27□□□□□ -2.05
BRCA1-214ENST00000477152 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
BRCA1-214ENST00000477152 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
BRCA1-214ENST00000477152 CCDC179H3BU77 68 aa2.23□□□□□ -2.05
BRCA1-214ENST00000477152 TMEM258P61165 79 aa2.23□□□□□ -2.05
BRCA1-214ENST00000477152 MT1AP04731 61 aa2.19□□□□□ -2.06
BRCA1-214ENST00000477152 RPS28P62857 69 aaKnown RBP2.17□□□□□ -2.06
BRCA1-214ENST00000477152 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
BRCA1-214ENST00000477152 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.07
BRCA1-214ENST00000477152 CDC42SE1Q9NRR8 79 aa2.15□□□□□ -2.07
BRCA1-214ENST00000477152 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
BRCA1-214ENST00000477152 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
BRCA1-214ENST00000477152 Q1T7F1 81 aa2.11□□□□□ -2.07
BRCA1-214ENST00000477152 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.08
BRCA1-214ENST00000477152 ROMO1P60602 79 aa2.08□□□□□ -2.08
BRCA1-214ENST00000477152 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
BRCA1-214ENST00000477152 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
BRCA1-214ENST00000477152 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
BRCA1-214ENST00000477152 PMAIP1Q13794 54 aa1.83□□□□□ -2.12
BRCA1-214ENST00000477152 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
BRCA1-214ENST00000477152 KTN1-AS1Q86SY8 53 aa1.8□□□□□ -2.12
BRCA1-214ENST00000477152 BRK1Q8WUW1 75 aa1.66□□□□□ -2.14
BRCA1-214ENST00000477152 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
BRCA1-214ENST00000477152 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
BRCA1-214ENST00000477152 INE1O15225 51 aa1.23□□□□□ -2.21
BRCA1-214ENST00000477152 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
BRCA1-214ENST00000477152 PRM1P04553 51 aa1.02□□□□□ -2.25
BRCA1-214ENST00000477152 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms