RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 ANAPC13Q9BS18 74 aa4.67□□□□□ -1.66
APTX-221ENST00000477119 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
APTX-221ENST00000477119 H3BS24 57 aa4.62□□□□□ -1.67
APTX-221ENST00000477119 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
APTX-221ENST00000477119 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
APTX-221ENST00000477119 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
APTX-221ENST00000477119 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
APTX-221ENST00000477119 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
APTX-221ENST00000477119 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
APTX-221ENST00000477119 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
APTX-221ENST00000477119 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
APTX-221ENST00000477119 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
APTX-221ENST00000477119 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
APTX-221ENST00000477119 UQCR11O14957 56 aa4.44□□□□□ -1.7
APTX-221ENST00000477119 TMEM258P61165 79 aa4.44□□□□□ -1.7
APTX-221ENST00000477119 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
APTX-221ENST00000477119 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
APTX-221ENST00000477119 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
APTX-221ENST00000477119 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
APTX-221ENST00000477119 PCP4P48539 62 aa4.33□□□□□ -1.72
APTX-221ENST00000477119 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
APTX-221ENST00000477119 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
APTX-221ENST00000477119 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
APTX-221ENST00000477119 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
APTX-221ENST00000477119 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
APTX-221ENST00000477119 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
APTX-221ENST00000477119 K7ERS5 55 aa4.28□□□□□ -1.72
APTX-221ENST00000477119 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
APTX-221ENST00000477119 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
APTX-221ENST00000477119 PSPHP1O15172 72 aa4.19□□□□□ -1.74
APTX-221ENST00000477119 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
APTX-221ENST00000477119 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
APTX-221ENST00000477119 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
APTX-221ENST00000477119 Q1T7F1 81 aa4.16□□□□□ -1.74
APTX-221ENST00000477119 V9GYY9 64 aa4.15□□□□□ -1.75
APTX-221ENST00000477119 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
APTX-221ENST00000477119 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
APTX-221ENST00000477119 MT1AP04731 61 aa4.04□□□□□ -1.76
APTX-221ENST00000477119 A6NED7 52 aa4.03□□□□□ -1.76
APTX-221ENST00000477119 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
APTX-221ENST00000477119 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
APTX-221ENST00000477119 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
APTX-221ENST00000477119 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
APTX-221ENST00000477119 ROMO1P60602 79 aa3.96□□□□□ -1.78
APTX-221ENST00000477119 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
APTX-221ENST00000477119 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
APTX-221ENST00000477119 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
APTX-221ENST00000477119 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
APTX-221ENST00000477119 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
APTX-221ENST00000477119 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
APTX-221ENST00000477119 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
APTX-221ENST00000477119 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
APTX-221ENST00000477119 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
APTX-221ENST00000477119 MT3P25713 68 aa3.71□□□□□ -1.82
APTX-221ENST00000477119 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
APTX-221ENST00000477119 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
APTX-221ENST00000477119 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
APTX-221ENST00000477119 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
APTX-221ENST00000477119 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
APTX-221ENST00000477119 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
APTX-221ENST00000477119 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
APTX-221ENST00000477119 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
APTX-221ENST00000477119 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
APTX-221ENST00000477119 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
APTX-221ENST00000477119 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
APTX-221ENST00000477119 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
APTX-221ENST00000477119 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
APTX-221ENST00000477119 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
APTX-221ENST00000477119 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
APTX-221ENST00000477119 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
APTX-221ENST00000477119 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
APTX-221ENST00000477119 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
APTX-221ENST00000477119 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
APTX-221ENST00000477119 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
APTX-221ENST00000477119 INE1O15225 51 aa2.02□□□□□ -2.09
APTX-221ENST00000477119 PRM1P04553 51 aa2.02□□□□□ -2.09
APTX-221ENST00000477119 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
APTX-221ENST00000477119 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 107.9 ms