RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
SREBF1-211ENST00000476994 KRTAP19-7Q3SYF9 63 aa6.61□□□□□ -1.35
SREBF1-211ENST00000476994 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
SREBF1-211ENST00000476994 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
SREBF1-211ENST00000476994 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
SREBF1-211ENST00000476994 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
SREBF1-211ENST00000476994 MT1EP04732 61 aa6.5□□□□□ -1.37
SREBF1-211ENST00000476994 KRTAP12-3P60328 96 aa6.4□□□□□ -1.38
SREBF1-211ENST00000476994 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
SREBF1-211ENST00000476994 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
SREBF1-211ENST00000476994 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
SREBF1-211ENST00000476994 MT1LQ93083 61 aa6.31□□□□□ -1.4
SREBF1-211ENST00000476994 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
SREBF1-211ENST00000476994 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
SREBF1-211ENST00000476994 GPR98Q8WXG9 6306 aa6.23□□□□□ -1.41
SREBF1-211ENST00000476994 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
SREBF1-211ENST00000476994 MT1GP13640 62 aa6.2□□□□□ -1.42
SREBF1-211ENST00000476994 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
SREBF1-211ENST00000476994 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
SREBF1-211ENST00000476994 MT1MQ8N339 61 aa6.14□□□□□ -1.43
SREBF1-211ENST00000476994 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
SREBF1-211ENST00000476994 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
SREBF1-211ENST00000476994 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
SREBF1-211ENST00000476994 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
SREBF1-211ENST00000476994 MT4P47944 62 aa6.02□□□□□ -1.45
SREBF1-211ENST00000476994 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
SREBF1-211ENST00000476994 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
SREBF1-211ENST00000476994 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
SREBF1-211ENST00000476994 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
SREBF1-211ENST00000476994 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
SREBF1-211ENST00000476994 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
SREBF1-211ENST00000476994 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
SREBF1-211ENST00000476994 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
SREBF1-211ENST00000476994 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
SREBF1-211ENST00000476994 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
SREBF1-211ENST00000476994 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
SREBF1-211ENST00000476994 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
SREBF1-211ENST00000476994 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
SREBF1-211ENST00000476994 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
SREBF1-211ENST00000476994 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
SREBF1-211ENST00000476994 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
SREBF1-211ENST00000476994 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
SREBF1-211ENST00000476994 MT1AP04731 61 aa5.37□□□□□ -1.55
SREBF1-211ENST00000476994 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
SREBF1-211ENST00000476994 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
SREBF1-211ENST00000476994 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
SREBF1-211ENST00000476994 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
SREBF1-211ENST00000476994 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
SREBF1-211ENST00000476994 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
SREBF1-211ENST00000476994 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
SREBF1-211ENST00000476994 KRTAP5-8O75690 187 aa4.94□□□□□ -1.62
SREBF1-211ENST00000476994 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
SREBF1-211ENST00000476994 MT3P25713 68 aa4.84□□□□□ -1.63
SREBF1-211ENST00000476994 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
SREBF1-211ENST00000476994 H3BS24 57 aa4.81□□□□□ -1.64
SREBF1-211ENST00000476994 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
SREBF1-211ENST00000476994 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
SREBF1-211ENST00000476994 MUC5BQ9HC84 5762 aaPredicted RBP4.77□□□□□ -1.65
SREBF1-211ENST00000476994 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
SREBF1-211ENST00000476994 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
SREBF1-211ENST00000476994 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
SREBF1-211ENST00000476994 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
SREBF1-211ENST00000476994 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
SREBF1-211ENST00000476994 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
SREBF1-211ENST00000476994 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
SREBF1-211ENST00000476994 LCE1CQ5T751 118 aa4.04□□□□□ -1.76
SREBF1-211ENST00000476994 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
SREBF1-211ENST00000476994 INE1O15225 51 aa3.83□□□□□ -1.8
SREBF1-211ENST00000476994 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
SREBF1-211ENST00000476994 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
SREBF1-211ENST00000476994 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SREBF1-211ENST00000476994 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
SREBF1-211ENST00000476994 PRM1P04553 51 aa3.5□□□□□ -1.85
SREBF1-211ENST00000476994 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
SREBF1-211ENST00000476994 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
SREBF1-211ENST00000476994 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
SREBF1-211ENST00000476994 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
SREBF1-211ENST00000476994 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms