RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
ABCF1-205ENST00000475993 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
ABCF1-205ENST00000475993 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
ABCF1-205ENST00000475993 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
ABCF1-205ENST00000475993 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
ABCF1-205ENST00000475993 MT1LQ93083 61 aa3.47□□□□□ -1.85
ABCF1-205ENST00000475993 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
ABCF1-205ENST00000475993 MT1EP04732 61 aa3.4□□□□□ -1.86
ABCF1-205ENST00000475993 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
ABCF1-205ENST00000475993 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
ABCF1-205ENST00000475993 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
ABCF1-205ENST00000475993 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
ABCF1-205ENST00000475993 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
ABCF1-205ENST00000475993 MT1GP13640 62 aa3.26□□□□□ -1.89
ABCF1-205ENST00000475993 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
ABCF1-205ENST00000475993 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
ABCF1-205ENST00000475993 PRM1P04553 51 aa3.23□□□□□ -1.89
ABCF1-205ENST00000475993 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
ABCF1-205ENST00000475993 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
ABCF1-205ENST00000475993 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
ABCF1-205ENST00000475993 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
ABCF1-205ENST00000475993 SSPOA2VEC9 5147 aa3.15□□□□□ -1.91
ABCF1-205ENST00000475993 MT1MQ8N339 61 aa3.15□□□□□ -1.91
ABCF1-205ENST00000475993 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
ABCF1-205ENST00000475993 MT1AP04731 61 aa3.13□□□□□ -1.91
ABCF1-205ENST00000475993 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
ABCF1-205ENST00000475993 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
ABCF1-205ENST00000475993 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
ABCF1-205ENST00000475993 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
ABCF1-205ENST00000475993 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.92
ABCF1-205ENST00000475993 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
ABCF1-205ENST00000475993 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
ABCF1-205ENST00000475993 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
ABCF1-205ENST00000475993 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
ABCF1-205ENST00000475993 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
ABCF1-205ENST00000475993 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
ABCF1-205ENST00000475993 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
ABCF1-205ENST00000475993 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
ABCF1-205ENST00000475993 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
ABCF1-205ENST00000475993 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
ABCF1-205ENST00000475993 MT3P25713 68 aa2.84□□□□□ -1.95
ABCF1-205ENST00000475993 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
ABCF1-205ENST00000475993 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
ABCF1-205ENST00000475993 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
ABCF1-205ENST00000475993 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
ABCF1-205ENST00000475993 NEBP20929 6669 aa2.65□□□□□ -1.99
ABCF1-205ENST00000475993 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
ABCF1-205ENST00000475993 SPRR2AP35326 72 aa2.62□□□□□ -1.99
ABCF1-205ENST00000475993 SPRR2EP22531 72 aa2.58□□□□□ -2
ABCF1-205ENST00000475993 SPRR2BP35325 72 aa2.58□□□□□ -2
ABCF1-205ENST00000475993 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
ABCF1-205ENST00000475993 SPRR2DP22532 72 aa2.49□□□□□ -2.01
ABCF1-205ENST00000475993 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
ABCF1-205ENST00000475993 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
ABCF1-205ENST00000475993 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
ABCF1-205ENST00000475993 MT4P47944 62 aa2.27□□□□□ -2.05
ABCF1-205ENST00000475993 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
ABCF1-205ENST00000475993 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
ABCF1-205ENST00000475993 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
ABCF1-205ENST00000475993 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
ABCF1-205ENST00000475993 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
ABCF1-205ENST00000475993 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
ABCF1-205ENST00000475993 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
ABCF1-205ENST00000475993 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
ABCF1-205ENST00000475993 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
ABCF1-205ENST00000475993 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
ABCF1-205ENST00000475993 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
ABCF1-205ENST00000475993 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
ABCF1-205ENST00000475993 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
ABCF1-205ENST00000475993 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
ABCF1-205ENST00000475993 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
ABCF1-205ENST00000475993 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
ABCF1-205ENST00000475993 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
ABCF1-205ENST00000475993 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
ABCF1-205ENST00000475993 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
ABCF1-205ENST00000475993 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
ABCF1-205ENST00000475993 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
ABCF1-205ENST00000475993 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 65 ms