RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 MT1LQ93083 61 aa7.2□□□□□ -1.26
HLA-B-252ENST00000474381 PSPHP1O15172 72 aa7.18□□□□□ -1.26
HLA-B-252ENST00000474381 K7ERS5 55 aa7.16□□□□□ -1.26
HLA-B-252ENST00000474381 MT1MQ8N339 61 aa7.14□□□□□ -1.27
HLA-B-252ENST00000474381 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
HLA-B-252ENST00000474381 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
HLA-B-252ENST00000474381 A6NED7 52 aa6.97□□□□□ -1.29
HLA-B-252ENST00000474381 RPS28P62857 69 aaKnown RBP6.97□□□□□ -1.29
HLA-B-252ENST00000474381 KRTAP4-3Q9BYR4 195 aa6.92□□□□□ -1.3
HLA-B-252ENST00000474381 PCP4P48539 62 aa6.91□□□□□ -1.3
HLA-B-252ENST00000474381 KRTAP4-9Q9BYQ8 210 aa6.9□□□□□ -1.3
HLA-B-252ENST00000474381 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
HLA-B-252ENST00000474381 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
HLA-B-252ENST00000474381 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
HLA-B-252ENST00000474381 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
HLA-B-252ENST00000474381 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
HLA-B-252ENST00000474381 KRTAP5-4Q6L8H1 288 aa6.77□□□□□ -1.33
HLA-B-252ENST00000474381 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
HLA-B-252ENST00000474381 MT4P47944 62 aa6.71□□□□□ -1.34
HLA-B-252ENST00000474381 ROMO1P60602 79 aa6.68□□□□□ -1.34
HLA-B-252ENST00000474381 HMCN1Q96RW7 5635 aa6.67□□□□□ -1.34
HLA-B-252ENST00000474381 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
HLA-B-252ENST00000474381 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
HLA-B-252ENST00000474381 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
HLA-B-252ENST00000474381 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
HLA-B-252ENST00000474381 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
HLA-B-252ENST00000474381 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
HLA-B-252ENST00000474381 SVIPQ8NHG7 77 aa6.4□□□□□ -1.38
HLA-B-252ENST00000474381 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
HLA-B-252ENST00000474381 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
HLA-B-252ENST00000474381 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
HLA-B-252ENST00000474381 KRTAP20-2Q3LI61 65 aa6.36□□□□□ -1.39
HLA-B-252ENST00000474381 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
HLA-B-252ENST00000474381 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
HLA-B-252ENST00000474381 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
HLA-B-252ENST00000474381 MT1AP04731 61 aa6.15□□□□□ -1.42
HLA-B-252ENST00000474381 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
HLA-B-252ENST00000474381 BRK1Q8WUW1 75 aa6.08□□□□□ -1.44
HLA-B-252ENST00000474381 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
HLA-B-252ENST00000474381 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
HLA-B-252ENST00000474381 KRTAP5-2Q701N4 177 aa5.95□□□□□ -1.46
HLA-B-252ENST00000474381 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
HLA-B-252ENST00000474381 H3BS24 57 aa5.8□□□□□ -1.48
HLA-B-252ENST00000474381 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
HLA-B-252ENST00000474381 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
HLA-B-252ENST00000474381 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
HLA-B-252ENST00000474381 MT3P25713 68 aa5.63□□□□□ -1.51
HLA-B-252ENST00000474381 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
HLA-B-252ENST00000474381 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
HLA-B-252ENST00000474381 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
HLA-B-252ENST00000474381 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
HLA-B-252ENST00000474381 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
HLA-B-252ENST00000474381 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
HLA-B-252ENST00000474381 MUC5BQ9HC84 5762 aaPredicted RBP5.22□□□□□ -1.57
HLA-B-252ENST00000474381 MUC5ACP98088 5654 aa5.2□□□□□ -1.58
HLA-B-252ENST00000474381 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
HLA-B-252ENST00000474381 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
HLA-B-252ENST00000474381 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
HLA-B-252ENST00000474381 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
HLA-B-252ENST00000474381 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
HLA-B-252ENST00000474381 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
HLA-B-252ENST00000474381 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
HLA-B-252ENST00000474381 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
HLA-B-252ENST00000474381 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
HLA-B-252ENST00000474381 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
HLA-B-252ENST00000474381 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
HLA-B-252ENST00000474381 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
HLA-B-252ENST00000474381 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
HLA-B-252ENST00000474381 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
HLA-B-252ENST00000474381 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
HLA-B-252ENST00000474381 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
HLA-B-252ENST00000474381 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
HLA-B-252ENST00000474381 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
HLA-B-252ENST00000474381 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
HLA-B-252ENST00000474381 PRM1P04553 51 aa3.39□□□□□ -1.87
HLA-B-252ENST00000474381 INE1O15225 51 aa3.38□□□□□ -1.87
HLA-B-252ENST00000474381 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
HLA-B-252ENST00000474381 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 18.5 ms