RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
TRAF4-209ENST00000473421 MT1EP04732 61 aa4.73□□□□□ -1.65
TRAF4-209ENST00000473421 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
TRAF4-209ENST00000473421 MT4P47944 62 aa4.72□□□□□ -1.65
TRAF4-209ENST00000473421 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
TRAF4-209ENST00000473421 A0A1B0GU33 70 aa4.65□□□□□ -1.67
TRAF4-209ENST00000473421 K7ERS5 55 aa4.65□□□□□ -1.67
TRAF4-209ENST00000473421 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
TRAF4-209ENST00000473421 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
TRAF4-209ENST00000473421 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
TRAF4-209ENST00000473421 MT1GP13640 62 aa4.55□□□□□ -1.68
TRAF4-209ENST00000473421 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
TRAF4-209ENST00000473421 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
TRAF4-209ENST00000473421 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
TRAF4-209ENST00000473421 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
TRAF4-209ENST00000473421 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
TRAF4-209ENST00000473421 MT1MQ8N339 61 aa4.53□□□□□ -1.68
TRAF4-209ENST00000473421 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
TRAF4-209ENST00000473421 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
TRAF4-209ENST00000473421 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
TRAF4-209ENST00000473421 ROMO1P60602 79 aa4.46□□□□□ -1.7
TRAF4-209ENST00000473421 MT1LQ93083 61 aa4.46□□□□□ -1.7
TRAF4-209ENST00000473421 A0A0D9SG42 100 aa4.45□□□□□ -1.7
TRAF4-209ENST00000473421 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
TRAF4-209ENST00000473421 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
TRAF4-209ENST00000473421 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
TRAF4-209ENST00000473421 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
TRAF4-209ENST00000473421 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
TRAF4-209ENST00000473421 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
TRAF4-209ENST00000473421 H3BS24 57 aa4.24□□□□□ -1.73
TRAF4-209ENST00000473421 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
TRAF4-209ENST00000473421 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
TRAF4-209ENST00000473421 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
TRAF4-209ENST00000473421 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
TRAF4-209ENST00000473421 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
TRAF4-209ENST00000473421 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
TRAF4-209ENST00000473421 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
TRAF4-209ENST00000473421 TNP1P09430 55 aa4.03□□□□□ -1.76
TRAF4-209ENST00000473421 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
TRAF4-209ENST00000473421 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
TRAF4-209ENST00000473421 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
TRAF4-209ENST00000473421 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
TRAF4-209ENST00000473421 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
TRAF4-209ENST00000473421 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
TRAF4-209ENST00000473421 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
TRAF4-209ENST00000473421 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
TRAF4-209ENST00000473421 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
TRAF4-209ENST00000473421 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
TRAF4-209ENST00000473421 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
TRAF4-209ENST00000473421 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
TRAF4-209ENST00000473421 MT1AP04731 61 aa3.75□□□□□ -1.81
TRAF4-209ENST00000473421 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
TRAF4-209ENST00000473421 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
TRAF4-209ENST00000473421 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
TRAF4-209ENST00000473421 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
TRAF4-209ENST00000473421 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
TRAF4-209ENST00000473421 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
TRAF4-209ENST00000473421 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
TRAF4-209ENST00000473421 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
TRAF4-209ENST00000473421 INE1O15225 51 aa3.43□□□□□ -1.86
TRAF4-209ENST00000473421 MT3P25713 68 aa3.41□□□□□ -1.86
TRAF4-209ENST00000473421 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
TRAF4-209ENST00000473421 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
TRAF4-209ENST00000473421 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
TRAF4-209ENST00000473421 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
TRAF4-209ENST00000473421 LCE1CQ5T751 118 aa3□□□□□ -1.93
TRAF4-209ENST00000473421 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
TRAF4-209ENST00000473421 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
TRAF4-209ENST00000473421 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
TRAF4-209ENST00000473421 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
TRAF4-209ENST00000473421 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
TRAF4-209ENST00000473421 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
TRAF4-209ENST00000473421 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
TRAF4-209ENST00000473421 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
TRAF4-209ENST00000473421 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
TRAF4-209ENST00000473421 PRM1P04553 51 aa2.3□□□□□ -2.04
TRAF4-209ENST00000473421 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
TRAF4-209ENST00000473421 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms