RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
MCF2L-223ENST00000473345 A8MU10 97 aa3.7□□□□□ -1.82
MCF2L-223ENST00000473345 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
MCF2L-223ENST00000473345 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
MCF2L-223ENST00000473345 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
MCF2L-223ENST00000473345 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
MCF2L-223ENST00000473345 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
MCF2L-223ENST00000473345 A0A0D9SG42 100 aa3.66□□□□□ -1.82
MCF2L-223ENST00000473345 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
MCF2L-223ENST00000473345 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
MCF2L-223ENST00000473345 MT1EP04732 61 aa3.62□□□□□ -1.83
MCF2L-223ENST00000473345 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
MCF2L-223ENST00000473345 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
MCF2L-223ENST00000473345 MT4P47944 62 aa3.59□□□□□ -1.83
MCF2L-223ENST00000473345 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
MCF2L-223ENST00000473345 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
MCF2L-223ENST00000473345 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
MCF2L-223ENST00000473345 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
MCF2L-223ENST00000473345 K7ERS5 55 aa3.57□□□□□ -1.84
MCF2L-223ENST00000473345 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
MCF2L-223ENST00000473345 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
MCF2L-223ENST00000473345 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
MCF2L-223ENST00000473345 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
MCF2L-223ENST00000473345 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
MCF2L-223ENST00000473345 PMAIP1Q13794 54 aa3.47□□□□□ -1.85
MCF2L-223ENST00000473345 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
MCF2L-223ENST00000473345 MT1MQ8N339 61 aa3.47□□□□□ -1.85
MCF2L-223ENST00000473345 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
MCF2L-223ENST00000473345 MT1GP13640 62 aa3.45□□□□□ -1.86
MCF2L-223ENST00000473345 ROMO1P60602 79 aa3.44□□□□□ -1.86
MCF2L-223ENST00000473345 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
MCF2L-223ENST00000473345 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
MCF2L-223ENST00000473345 MT1LQ93083 61 aa3.41□□□□□ -1.86
MCF2L-223ENST00000473345 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
MCF2L-223ENST00000473345 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
MCF2L-223ENST00000473345 TNP1P09430 55 aa3.36□□□□□ -1.87
MCF2L-223ENST00000473345 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
MCF2L-223ENST00000473345 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
MCF2L-223ENST00000473345 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
MCF2L-223ENST00000473345 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
MCF2L-223ENST00000473345 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
MCF2L-223ENST00000473345 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
MCF2L-223ENST00000473345 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
MCF2L-223ENST00000473345 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
MCF2L-223ENST00000473345 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
MCF2L-223ENST00000473345 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
MCF2L-223ENST00000473345 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
MCF2L-223ENST00000473345 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
MCF2L-223ENST00000473345 MT3P25713 68 aa3.03□□□□□ -1.92
MCF2L-223ENST00000473345 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
MCF2L-223ENST00000473345 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
MCF2L-223ENST00000473345 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
MCF2L-223ENST00000473345 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
MCF2L-223ENST00000473345 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
MCF2L-223ENST00000473345 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
MCF2L-223ENST00000473345 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
MCF2L-223ENST00000473345 MT1AP04731 61 aa2.87□□□□□ -1.95
MCF2L-223ENST00000473345 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
MCF2L-223ENST00000473345 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
MCF2L-223ENST00000473345 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
MCF2L-223ENST00000473345 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
MCF2L-223ENST00000473345 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
MCF2L-223ENST00000473345 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
MCF2L-223ENST00000473345 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
MCF2L-223ENST00000473345 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
MCF2L-223ENST00000473345 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
MCF2L-223ENST00000473345 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
MCF2L-223ENST00000473345 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
MCF2L-223ENST00000473345 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
MCF2L-223ENST00000473345 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
MCF2L-223ENST00000473345 INE1O15225 51 aa2.12□□□□□ -2.07
MCF2L-223ENST00000473345 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
MCF2L-223ENST00000473345 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
MCF2L-223ENST00000473345 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
MCF2L-223ENST00000473345 PRM1P04553 51 aa1.77□□□□□ -2.13
MCF2L-223ENST00000473345 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
MCF2L-223ENST00000473345 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
MCF2L-223ENST00000473345 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 62 ms