RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
VTI1A-203ENST00000472892 CYSTM1Q9H1C7 97 aa5.54□□□□□ -1.52
VTI1A-203ENST00000472892 H7BZZ5 65 aa5.52□□□□□ -1.53
VTI1A-203ENST00000472892 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
VTI1A-203ENST00000472892 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
VTI1A-203ENST00000472892 A0A1B0GU69 56 aa5.44□□□□□ -1.54
VTI1A-203ENST00000472892 MT1MQ8N339 61 aa5.44□□□□□ -1.54
VTI1A-203ENST00000472892 MT1LQ93083 61 aa5.43□□□□□ -1.54
VTI1A-203ENST00000472892 A8MU10 97 aa5.41□□□□□ -1.54
VTI1A-203ENST00000472892 MT3P25713 68 aa5.38□□□□□ -1.55
VTI1A-203ENST00000472892 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
VTI1A-203ENST00000472892 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
VTI1A-203ENST00000472892 TNP1P09430 55 aa5.35□□□□□ -1.55
VTI1A-203ENST00000472892 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
VTI1A-203ENST00000472892 MT4P47944 62 aa5.33□□□□□ -1.56
VTI1A-203ENST00000472892 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
VTI1A-203ENST00000472892 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
VTI1A-203ENST00000472892 KRTAP5-11Q6L8G4 156 aa5.29□□□□□ -1.56
VTI1A-203ENST00000472892 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
VTI1A-203ENST00000472892 ANAPC13Q9BS18 74 aa5.25□□□□□ -1.57
VTI1A-203ENST00000472892 PRR15LQ9BU68 103 aa5.23□□□□□ -1.57
VTI1A-203ENST00000472892 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
VTI1A-203ENST00000472892 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
VTI1A-203ENST00000472892 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
VTI1A-203ENST00000472892 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
VTI1A-203ENST00000472892 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.59
VTI1A-203ENST00000472892 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
VTI1A-203ENST00000472892 KRTAP5-10Q6L8G5 202 aa5.11□□□□□ -1.59
VTI1A-203ENST00000472892 UQCR11O14957 56 aa5.06□□□□□ -1.6
VTI1A-203ENST00000472892 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
VTI1A-203ENST00000472892 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
VTI1A-203ENST00000472892 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
VTI1A-203ENST00000472892 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
VTI1A-203ENST00000472892 TMEM258P61165 79 aa4.96□□□□□ -1.62
VTI1A-203ENST00000472892 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
VTI1A-203ENST00000472892 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
VTI1A-203ENST00000472892 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
VTI1A-203ENST00000472892 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
VTI1A-203ENST00000472892 K7ERS5 55 aa4.85□□□□□ -1.63
VTI1A-203ENST00000472892 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
VTI1A-203ENST00000472892 PSPHP1O15172 72 aa4.75□□□□□ -1.65
VTI1A-203ENST00000472892 V9GYY9 64 aa4.75□□□□□ -1.65
VTI1A-203ENST00000472892 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
VTI1A-203ENST00000472892 Q1T7F1 81 aa4.72□□□□□ -1.65
VTI1A-203ENST00000472892 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
VTI1A-203ENST00000472892 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
VTI1A-203ENST00000472892 MT1AP04731 61 aa4.62□□□□□ -1.67
VTI1A-203ENST00000472892 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
VTI1A-203ENST00000472892 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
VTI1A-203ENST00000472892 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
VTI1A-203ENST00000472892 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
VTI1A-203ENST00000472892 A6NED7 52 aa4.56□□□□□ -1.68
VTI1A-203ENST00000472892 ROMO1P60602 79 aa4.51□□□□□ -1.69
VTI1A-203ENST00000472892 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
VTI1A-203ENST00000472892 RPS28P62857 69 aaKnown RBP4.49□□□□□ -1.69
VTI1A-203ENST00000472892 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
VTI1A-203ENST00000472892 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
VTI1A-203ENST00000472892 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
VTI1A-203ENST00000472892 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
VTI1A-203ENST00000472892 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
VTI1A-203ENST00000472892 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
VTI1A-203ENST00000472892 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
VTI1A-203ENST00000472892 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
VTI1A-203ENST00000472892 BRK1Q8WUW1 75 aa3.71□□□□□ -1.82
VTI1A-203ENST00000472892 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
VTI1A-203ENST00000472892 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
VTI1A-203ENST00000472892 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
VTI1A-203ENST00000472892 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
VTI1A-203ENST00000472892 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
VTI1A-203ENST00000472892 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
VTI1A-203ENST00000472892 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
VTI1A-203ENST00000472892 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
VTI1A-203ENST00000472892 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
VTI1A-203ENST00000472892 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
VTI1A-203ENST00000472892 INE1O15225 51 aa2.29□□□□□ -2.04
VTI1A-203ENST00000472892 PRM1P04553 51 aa2.29□□□□□ -2.04
VTI1A-203ENST00000472892 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
VTI1A-203ENST00000472892 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 106 ms