RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
ABCF3-209ENST00000472608 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
ABCF3-209ENST00000472608 K7ERS5 55 aa5.36□□□□□ -1.55
ABCF3-209ENST00000472608 A6NED7 52 aa5.32□□□□□ -1.56
ABCF3-209ENST00000472608 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
ABCF3-209ENST00000472608 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
ABCF3-209ENST00000472608 MT1EP04732 61 aa5.26□□□□□ -1.57
ABCF3-209ENST00000472608 KRTAP5-7Q6L8G8 165 aa5.26□□□□□ -1.57
ABCF3-209ENST00000472608 MT4P47944 62 aa5.25□□□□□ -1.57
ABCF3-209ENST00000472608 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
ABCF3-209ENST00000472608 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
ABCF3-209ENST00000472608 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
ABCF3-209ENST00000472608 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
ABCF3-209ENST00000472608 CDC42SE1Q9NRR8 79 aa5.16□□□□□ -1.58
ABCF3-209ENST00000472608 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
ABCF3-209ENST00000472608 MT1GP13640 62 aa5.11□□□□□ -1.59
ABCF3-209ENST00000472608 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
ABCF3-209ENST00000472608 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
ABCF3-209ENST00000472608 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
ABCF3-209ENST00000472608 MT1LQ93083 61 aa5.07□□□□□ -1.6
ABCF3-209ENST00000472608 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
ABCF3-209ENST00000472608 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
ABCF3-209ENST00000472608 ROMO1P60602 79 aa5.03□□□□□ -1.6
ABCF3-209ENST00000472608 MT1MQ8N339 61 aa4.99□□□□□ -1.61
ABCF3-209ENST00000472608 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
ABCF3-209ENST00000472608 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
ABCF3-209ENST00000472608 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
ABCF3-209ENST00000472608 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
ABCF3-209ENST00000472608 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
ABCF3-209ENST00000472608 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
ABCF3-209ENST00000472608 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
ABCF3-209ENST00000472608 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
ABCF3-209ENST00000472608 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
ABCF3-209ENST00000472608 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
ABCF3-209ENST00000472608 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
ABCF3-209ENST00000472608 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
ABCF3-209ENST00000472608 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
ABCF3-209ENST00000472608 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
ABCF3-209ENST00000472608 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
ABCF3-209ENST00000472608 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
ABCF3-209ENST00000472608 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
ABCF3-209ENST00000472608 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
ABCF3-209ENST00000472608 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
ABCF3-209ENST00000472608 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
ABCF3-209ENST00000472608 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
ABCF3-209ENST00000472608 H3BS24 57 aa4.35□□□□□ -1.71
ABCF3-209ENST00000472608 MT1AP04731 61 aa4.33□□□□□ -1.72
ABCF3-209ENST00000472608 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
ABCF3-209ENST00000472608 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
ABCF3-209ENST00000472608 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
ABCF3-209ENST00000472608 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
ABCF3-209ENST00000472608 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
ABCF3-209ENST00000472608 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
ABCF3-209ENST00000472608 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
ABCF3-209ENST00000472608 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
ABCF3-209ENST00000472608 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
ABCF3-209ENST00000472608 MT3P25713 68 aa3.97□□□□□ -1.77
ABCF3-209ENST00000472608 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
ABCF3-209ENST00000472608 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
ABCF3-209ENST00000472608 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
ABCF3-209ENST00000472608 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
ABCF3-209ENST00000472608 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
ABCF3-209ENST00000472608 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
ABCF3-209ENST00000472608 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
ABCF3-209ENST00000472608 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
ABCF3-209ENST00000472608 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
ABCF3-209ENST00000472608 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
ABCF3-209ENST00000472608 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
ABCF3-209ENST00000472608 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
ABCF3-209ENST00000472608 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
ABCF3-209ENST00000472608 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
ABCF3-209ENST00000472608 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
ABCF3-209ENST00000472608 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
ABCF3-209ENST00000472608 INE1O15225 51 aa2.59□□□□□ -1.99
ABCF3-209ENST00000472608 PRM1P04553 51 aa2.56□□□□□ -2
ABCF3-209ENST00000472608 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
ABCF3-209ENST00000472608 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
ABCF3-209ENST00000472608 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 438.3 ms