RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ANAPC13Q9BS18 74 aa7.76□□□□□ -1.17
C9orf3-213ENST00000471978 PRR15LQ9BU68 103 aa7.74□□□□□ -1.17
C9orf3-213ENST00000471978 AHNAK2Q8IVF2 5795 aa7.68□□□□□ -1.18
C9orf3-213ENST00000471978 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
C9orf3-213ENST00000471978 CCDC179H3BU77 68 aa7.63□□□□□ -1.19
C9orf3-213ENST00000471978 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
C9orf3-213ENST00000471978 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
C9orf3-213ENST00000471978 ATP5EP56381 51 aaPredicted RBP7.6□□□□□ -1.19
C9orf3-213ENST00000471978 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.19
C9orf3-213ENST00000471978 KRTAP5-10Q6L8G5 202 aa7.54□□□□□ -1.2
C9orf3-213ENST00000471978 UQCR11O14957 56 aa7.46□□□□□ -1.22
C9orf3-213ENST00000471978 KRTAP5-5Q701N2 237 aaPredicted RBP7.37□□□□□ -1.23
C9orf3-213ENST00000471978 KRTAP20-2Q3LI61 65 aa7.35□□□□□ -1.23
C9orf3-213ENST00000471978 KRTAP25-1Q3LHN0 102 aa7.34□□□□□ -1.23
C9orf3-213ENST00000471978 KRTAP5-3Q6L8H2 238 aa7.32□□□□□ -1.24
C9orf3-213ENST00000471978 TMEM258P61165 79 aa7.31□□□□□ -1.24
C9orf3-213ENST00000471978 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
C9orf3-213ENST00000471978 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
C9orf3-213ENST00000471978 KRTAP5-7Q6L8G8 165 aa7.27□□□□□ -1.25
C9orf3-213ENST00000471978 KRTAP12-4P60329 112 aa7.24□□□□□ -1.25
C9orf3-213ENST00000471978 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
C9orf3-213ENST00000471978 K7ERS5 55 aa7.19□□□□□ -1.26
C9orf3-213ENST00000471978 SYNE1Q8NF91 8797 aaKnown RBP7.16□□□□□ -1.26
C9orf3-213ENST00000471978 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
C9orf3-213ENST00000471978 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
C9orf3-213ENST00000471978 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
C9orf3-213ENST00000471978 PSPHP1O15172 72 aa7.02□□□□□ -1.29
C9orf3-213ENST00000471978 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
C9orf3-213ENST00000471978 V9GYY9 64 aa6.98□□□□□ -1.29
C9orf3-213ENST00000471978 Q1T7F1 81 aa6.92□□□□□ -1.3
C9orf3-213ENST00000471978 MT1AP04731 61 aa6.8□□□□□ -1.32
C9orf3-213ENST00000471978 KRTAP6-1Q3LI64 71 aa6.78□□□□□ -1.32
C9orf3-213ENST00000471978 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
C9orf3-213ENST00000471978 A6NED7 52 aa6.76□□□□□ -1.33
C9orf3-213ENST00000471978 KRTAP5-2Q701N4 177 aa6.76□□□□□ -1.33
C9orf3-213ENST00000471978 KRTAP4-11Q9BYQ6 195 aa6.76□□□□□ -1.33
C9orf3-213ENST00000471978 RPS28P62857 69 aaKnown RBP6.66□□□□□ -1.34
C9orf3-213ENST00000471978 ROMO1P60602 79 aa6.65□□□□□ -1.34
C9orf3-213ENST00000471978 KRTAP9-6A8MVA2 160 aa6.61□□□□□ -1.35
C9orf3-213ENST00000471978 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
C9orf3-213ENST00000471978 KRTAP5-8O75690 187 aa6.53□□□□□ -1.36
C9orf3-213ENST00000471978 KRTAP6-2Q3LI66 62 aa6.53□□□□□ -1.36
C9orf3-213ENST00000471978 OBSCNQ5VST9 7968 aa6.41□□□□□ -1.38
C9orf3-213ENST00000471978 AHNAKQ09666 5890 aaKnown RBP6.36□□□□□ -1.39
C9orf3-213ENST00000471978 MUC5BQ9HC84 5762 aaPredicted RBP6.36□□□□□ -1.39
C9orf3-213ENST00000471978 MUC5ACP98088 5654 aa6.36□□□□□ -1.39
C9orf3-213ENST00000471978 MT3P25713 68 aa6.24□□□□□ -1.41
C9orf3-213ENST00000471978 KRTAP9-9Q9BYP9 154 aa6.24□□□□□ -1.41
C9orf3-213ENST00000471978 KRTAP5-1Q6L8H4 278 aa6.1□□□□□ -1.43
C9orf3-213ENST00000471978 PCP4P48539 62 aa5.94□□□□□ -1.46
C9orf3-213ENST00000471978 LCE1EQ5T753 118 aa5.77□□□□□ -1.49
C9orf3-213ENST00000471978 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
C9orf3-213ENST00000471978 LCE1BQ5T7P3 118 aa5.47□□□□□ -1.53
C9orf3-213ENST00000471978 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
C9orf3-213ENST00000471978 LCE1CQ5T751 118 aa5.36□□□□□ -1.55
C9orf3-213ENST00000471978 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
C9orf3-213ENST00000471978 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
C9orf3-213ENST00000471978 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
C9orf3-213ENST00000471978 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
C9orf3-213ENST00000471978 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
C9orf3-213ENST00000471978 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
C9orf3-213ENST00000471978 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.84□□□□□ -1.63
C9orf3-213ENST00000471978 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
C9orf3-213ENST00000471978 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
C9orf3-213ENST00000471978 KRTAP21-2Q3LI59 83 aa4.47□□□□□ -1.69
C9orf3-213ENST00000471978 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
C9orf3-213ENST00000471978 H3BS24 57 aa4.45□□□□□ -1.7
C9orf3-213ENST00000471978 PHGR1C9JFL3 82 aa4.41□□□□□ -1.7
C9orf3-213ENST00000471978 KTN1-AS1Q86SY8 53 aa4.37□□□□□ -1.71
C9orf3-213ENST00000471978 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
C9orf3-213ENST00000471978 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
C9orf3-213ENST00000471978 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
C9orf3-213ENST00000471978 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
C9orf3-213ENST00000471978 PRM1P04553 51 aa3.39□□□□□ -1.87
C9orf3-213ENST00000471978 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.87
C9orf3-213ENST00000471978 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
C9orf3-213ENST00000471978 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
C9orf3-213ENST00000471978 INE1O15225 51 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms