RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 KRTAP4-4Q9BYR3 166 aa4.85□□□□□ -1.63
LINC00888-202ENST00000471496 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
LINC00888-202ENST00000471496 SPINT4Q6UDR6 99 aa4.82□□□□□ -1.64
LINC00888-202ENST00000471496 V9GYY9 64 aa4.82□□□□□ -1.64
LINC00888-202ENST00000471496 A8MU10 97 aa4.81□□□□□ -1.64
LINC00888-202ENST00000471496 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
LINC00888-202ENST00000471496 SPRR2EP22531 72 aa4.79□□□□□ -1.64
LINC00888-202ENST00000471496 SPRR2BP35325 72 aa4.79□□□□□ -1.64
LINC00888-202ENST00000471496 SPRR2AP35326 72 aa4.79□□□□□ -1.64
LINC00888-202ENST00000471496 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
LINC00888-202ENST00000471496 PRR15LQ9BU68 103 aa4.77□□□□□ -1.65
LINC00888-202ENST00000471496 Q1T7F1 81 aa4.69□□□□□ -1.66
LINC00888-202ENST00000471496 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
LINC00888-202ENST00000471496 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
LINC00888-202ENST00000471496 UQCR11O14957 56 aa4.66□□□□□ -1.66
LINC00888-202ENST00000471496 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.66
LINC00888-202ENST00000471496 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.66
LINC00888-202ENST00000471496 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.66
LINC00888-202ENST00000471496 SPRR2DP22532 72 aa4.62□□□□□ -1.67
LINC00888-202ENST00000471496 MT1EP04732 61 aa4.6□□□□□ -1.67
LINC00888-202ENST00000471496 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
LINC00888-202ENST00000471496 PSPHP1O15172 72 aa4.57□□□□□ -1.68
LINC00888-202ENST00000471496 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
LINC00888-202ENST00000471496 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
LINC00888-202ENST00000471496 TNP1P09430 55 aa4.55□□□□□ -1.68
LINC00888-202ENST00000471496 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
LINC00888-202ENST00000471496 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
LINC00888-202ENST00000471496 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
LINC00888-202ENST00000471496 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
LINC00888-202ENST00000471496 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
LINC00888-202ENST00000471496 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
LINC00888-202ENST00000471496 A6NED7 52 aa4.44□□□□□ -1.7
LINC00888-202ENST00000471496 MT1GP13640 62 aa4.43□□□□□ -1.7
LINC00888-202ENST00000471496 MT1LQ93083 61 aa4.43□□□□□ -1.7
LINC00888-202ENST00000471496 K7ERS5 55 aa4.39□□□□□ -1.71
LINC00888-202ENST00000471496 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
LINC00888-202ENST00000471496 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
LINC00888-202ENST00000471496 MT1MQ8N339 61 aa4.37□□□□□ -1.71
LINC00888-202ENST00000471496 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
LINC00888-202ENST00000471496 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
LINC00888-202ENST00000471496 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
LINC00888-202ENST00000471496 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
LINC00888-202ENST00000471496 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
LINC00888-202ENST00000471496 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
LINC00888-202ENST00000471496 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
LINC00888-202ENST00000471496 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
LINC00888-202ENST00000471496 ROMO1P60602 79 aa4.18□□□□□ -1.74
LINC00888-202ENST00000471496 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
LINC00888-202ENST00000471496 MT4P47944 62 aa4.04□□□□□ -1.76
LINC00888-202ENST00000471496 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
LINC00888-202ENST00000471496 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
LINC00888-202ENST00000471496 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
LINC00888-202ENST00000471496 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
LINC00888-202ENST00000471496 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
LINC00888-202ENST00000471496 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
LINC00888-202ENST00000471496 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
LINC00888-202ENST00000471496 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
LINC00888-202ENST00000471496 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
LINC00888-202ENST00000471496 MT1AP04731 61 aa3.76□□□□□ -1.81
LINC00888-202ENST00000471496 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
LINC00888-202ENST00000471496 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
LINC00888-202ENST00000471496 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
LINC00888-202ENST00000471496 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
LINC00888-202ENST00000471496 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
LINC00888-202ENST00000471496 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
LINC00888-202ENST00000471496 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
LINC00888-202ENST00000471496 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
LINC00888-202ENST00000471496 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
LINC00888-202ENST00000471496 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
LINC00888-202ENST00000471496 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
LINC00888-202ENST00000471496 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
LINC00888-202ENST00000471496 INE1O15225 51 aa2.93□□□□□ -1.94
LINC00888-202ENST00000471496 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
LINC00888-202ENST00000471496 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
LINC00888-202ENST00000471496 PRM1P04553 51 aa2.15□□□□□ -2.06
LINC00888-202ENST00000471496 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
LINC00888-202ENST00000471496 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms