RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
HDAC7-220ENST00000471235 KRTAP2-2Q9BYT5 123 aa7.1□□□□□ -1.27
HDAC7-220ENST00000471235 KRTAP2-1Q9BYU5 128 aa7.1□□□□□ -1.27
HDAC7-220ENST00000471235 MT1LQ93083 61 aa7.06□□□□□ -1.28
HDAC7-220ENST00000471235 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
HDAC7-220ENST00000471235 MT1GP13640 62 aa7.04□□□□□ -1.28
HDAC7-220ENST00000471235 KRTAP12-3P60328 96 aa7□□□□□ -1.29
HDAC7-220ENST00000471235 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
HDAC7-220ENST00000471235 MT1MQ8N339 61 aa6.97□□□□□ -1.29
HDAC7-220ENST00000471235 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
HDAC7-220ENST00000471235 ROMO1P60602 79 aa6.9□□□□□ -1.3
HDAC7-220ENST00000471235 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
HDAC7-220ENST00000471235 DSTQ03001 7570 aaKnown RBP6.86□□□□□ -1.31
HDAC7-220ENST00000471235 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
HDAC7-220ENST00000471235 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
HDAC7-220ENST00000471235 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
HDAC7-220ENST00000471235 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
HDAC7-220ENST00000471235 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
HDAC7-220ENST00000471235 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
HDAC7-220ENST00000471235 KRTAP4-9Q9BYQ8 210 aa6.54□□□□□ -1.36
HDAC7-220ENST00000471235 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
HDAC7-220ENST00000471235 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
HDAC7-220ENST00000471235 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.38
HDAC7-220ENST00000471235 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
HDAC7-220ENST00000471235 MT4P47944 62 aa6.4□□□□□ -1.38
HDAC7-220ENST00000471235 KRTAP5-5Q701N2 237 aaPredicted RBP6.37□□□□□ -1.39
HDAC7-220ENST00000471235 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
HDAC7-220ENST00000471235 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
HDAC7-220ENST00000471235 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
HDAC7-220ENST00000471235 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
HDAC7-220ENST00000471235 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
HDAC7-220ENST00000471235 KRTAP20-2Q3LI61 65 aa6.08□□□□□ -1.44
HDAC7-220ENST00000471235 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
HDAC7-220ENST00000471235 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
HDAC7-220ENST00000471235 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
HDAC7-220ENST00000471235 GPR98Q8WXG9 6306 aa6.06□□□□□ -1.44
HDAC7-220ENST00000471235 MT1AP04731 61 aa6.02□□□□□ -1.45
HDAC7-220ENST00000471235 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
HDAC7-220ENST00000471235 AHNAK2Q8IVF2 5795 aa5.98□□□□□ -1.45
HDAC7-220ENST00000471235 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
HDAC7-220ENST00000471235 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
HDAC7-220ENST00000471235 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
HDAC7-220ENST00000471235 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
HDAC7-220ENST00000471235 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
HDAC7-220ENST00000471235 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
HDAC7-220ENST00000471235 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
HDAC7-220ENST00000471235 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
HDAC7-220ENST00000471235 MT3P25713 68 aa5.46□□□□□ -1.54
HDAC7-220ENST00000471235 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
HDAC7-220ENST00000471235 KRTAP5-8O75690 187 aa5.28□□□□□ -1.56
HDAC7-220ENST00000471235 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
HDAC7-220ENST00000471235 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
HDAC7-220ENST00000471235 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
HDAC7-220ENST00000471235 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
HDAC7-220ENST00000471235 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
HDAC7-220ENST00000471235 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
HDAC7-220ENST00000471235 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
HDAC7-220ENST00000471235 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
HDAC7-220ENST00000471235 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
HDAC7-220ENST00000471235 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
HDAC7-220ENST00000471235 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
HDAC7-220ENST00000471235 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
HDAC7-220ENST00000471235 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
HDAC7-220ENST00000471235 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
HDAC7-220ENST00000471235 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
HDAC7-220ENST00000471235 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
HDAC7-220ENST00000471235 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
HDAC7-220ENST00000471235 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
HDAC7-220ENST00000471235 INE1O15225 51 aa4.02□□□□□ -1.77
HDAC7-220ENST00000471235 H3BS24 57 aa3.96□□□□□ -1.78
HDAC7-220ENST00000471235 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
HDAC7-220ENST00000471235 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
HDAC7-220ENST00000471235 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
HDAC7-220ENST00000471235 PRM1P04553 51 aa3.56□□□□□ -1.84
HDAC7-220ENST00000471235 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
HDAC7-220ENST00000471235 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
HDAC7-220ENST00000471235 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
HDAC7-220ENST00000471235 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 104.7 ms