RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
VARS-222ENST00000470953 SPINT4Q6UDR6 99 aa2.62□□□□□ -1.99
VARS-222ENST00000470953 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
VARS-222ENST00000470953 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
VARS-222ENST00000470953 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
VARS-222ENST00000470953 CRIPTQ9P021 101 aa2.57□□□□□ -2
VARS-222ENST00000470953 A0A1B0GU33 70 aa2.56□□□□□ -2
VARS-222ENST00000470953 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
VARS-222ENST00000470953 H0YAA0 97 aa2.54□□□□□ -2
VARS-222ENST00000470953 R4GN34 69 aa2.52□□□□□ -2.01
VARS-222ENST00000470953 KRTAP23-1A1A580 65 aa2.51□□□□□ -2.01
VARS-222ENST00000470953 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
VARS-222ENST00000470953 M0QZ58 72 aa2.5□□□□□ -2.01
VARS-222ENST00000470953 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
VARS-222ENST00000470953 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
VARS-222ENST00000470953 KRTAP4-8Q9BYQ9 185 aa2.49□□□□□ -2.01
VARS-222ENST00000470953 PLAC4Q8WY50 150 aa2.48□□□□□ -2.01
VARS-222ENST00000470953 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
VARS-222ENST00000470953 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
VARS-222ENST00000470953 LOC100996750A0A140TA64 210 aa2.42□□□□□ -2.02
VARS-222ENST00000470953 MT1XP80297 61 aa2.42□□□□□ -2.02
VARS-222ENST00000470953 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
VARS-222ENST00000470953 INE1O15225 51 aa2.36□□□□□ -2.03
VARS-222ENST00000470953 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
VARS-222ENST00000470953 A0A0D9SG42 100 aa2.31□□□□□ -2.04
VARS-222ENST00000470953 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
VARS-222ENST00000470953 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
VARS-222ENST00000470953 LCE5AQ5TCM9 118 aa2.3□□□□□ -2.04
VARS-222ENST00000470953 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
VARS-222ENST00000470953 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
VARS-222ENST00000470953 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
VARS-222ENST00000470953 KRTAP10-12P60413 245 aa2.26□□□□□ -2.05
VARS-222ENST00000470953 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
VARS-222ENST00000470953 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
VARS-222ENST00000470953 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
VARS-222ENST00000470953 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
VARS-222ENST00000470953 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
VARS-222ENST00000470953 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
VARS-222ENST00000470953 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
VARS-222ENST00000470953 MT1EP04732 61 aa2.16□□□□□ -2.06
VARS-222ENST00000470953 TNP1P09430 55 aa2.14□□□□□ -2.07
VARS-222ENST00000470953 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
VARS-222ENST00000470953 KRTAP4-3Q9BYR4 195 aa2.13□□□□□ -2.07
VARS-222ENST00000470953 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
VARS-222ENST00000470953 MT1GP13640 62 aa2.09□□□□□ -2.07
VARS-222ENST00000470953 MT1MQ8N339 61 aa2.09□□□□□ -2.07
VARS-222ENST00000470953 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
VARS-222ENST00000470953 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
VARS-222ENST00000470953 MT1LQ93083 61 aa2.02□□□□□ -2.09
VARS-222ENST00000470953 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
VARS-222ENST00000470953 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
VARS-222ENST00000470953 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
VARS-222ENST00000470953 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
VARS-222ENST00000470953 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
VARS-222ENST00000470953 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
VARS-222ENST00000470953 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
VARS-222ENST00000470953 KRTAP19-4Q3LI73 84 aa1.86□□□□□ -2.11
VARS-222ENST00000470953 LCE3CQ5T5A8 94 aa1.83□□□□□ -2.12
VARS-222ENST00000470953 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
VARS-222ENST00000470953 MT1AP04731 61 aa1.73□□□□□ -2.13
VARS-222ENST00000470953 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
VARS-222ENST00000470953 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
VARS-222ENST00000470953 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
VARS-222ENST00000470953 MT3P25713 68 aa1.59□□□□□ -2.15
VARS-222ENST00000470953 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
VARS-222ENST00000470953 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
VARS-222ENST00000470953 LCE1EQ5T753 118 aa1.49□□□□□ -2.17
VARS-222ENST00000470953 LCE1FQ5T754 118 aa1.44□□□□□ -2.18
VARS-222ENST00000470953 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
VARS-222ENST00000470953 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
VARS-222ENST00000470953 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.19
VARS-222ENST00000470953 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
VARS-222ENST00000470953 PRM1P04553 51 aa1.32□□□□□ -2.2
VARS-222ENST00000470953 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
VARS-222ENST00000470953 LCE3EQ5T5B0 92 aa1.28□□□□□ -2.2
VARS-222ENST00000470953 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
VARS-222ENST00000470953 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
VARS-222ENST00000470953 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 61.2 ms