RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
TOP3B-215ENST00000470338 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
TOP3B-215ENST00000470338 TNP1P09430 55 aa5.17□□□□□ -1.58
TOP3B-215ENST00000470338 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
TOP3B-215ENST00000470338 MT1GP13640 62 aa5.1□□□□□ -1.59
TOP3B-215ENST00000470338 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
TOP3B-215ENST00000470338 MT1LQ93083 61 aa5.04□□□□□ -1.6
TOP3B-215ENST00000470338 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
TOP3B-215ENST00000470338 MT1MQ8N339 61 aa5□□□□□ -1.61
TOP3B-215ENST00000470338 PRO0628Q9UI54 55 aa5□□□□□ -1.61
TOP3B-215ENST00000470338 ROMO1P60602 79 aa4.95□□□□□ -1.62
TOP3B-215ENST00000470338 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
TOP3B-215ENST00000470338 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
TOP3B-215ENST00000470338 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
TOP3B-215ENST00000470338 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
TOP3B-215ENST00000470338 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
TOP3B-215ENST00000470338 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
TOP3B-215ENST00000470338 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
TOP3B-215ENST00000470338 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
TOP3B-215ENST00000470338 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
TOP3B-215ENST00000470338 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
TOP3B-215ENST00000470338 MT4P47944 62 aa4.7□□□□□ -1.66
TOP3B-215ENST00000470338 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
TOP3B-215ENST00000470338 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
TOP3B-215ENST00000470338 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
TOP3B-215ENST00000470338 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
TOP3B-215ENST00000470338 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
TOP3B-215ENST00000470338 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
TOP3B-215ENST00000470338 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
TOP3B-215ENST00000470338 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
TOP3B-215ENST00000470338 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
TOP3B-215ENST00000470338 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
TOP3B-215ENST00000470338 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
TOP3B-215ENST00000470338 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
TOP3B-215ENST00000470338 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
TOP3B-215ENST00000470338 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
TOP3B-215ENST00000470338 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
TOP3B-215ENST00000470338 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
TOP3B-215ENST00000470338 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
TOP3B-215ENST00000470338 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
TOP3B-215ENST00000470338 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
TOP3B-215ENST00000470338 MT1AP04731 61 aa4.3□□□□□ -1.72
TOP3B-215ENST00000470338 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
TOP3B-215ENST00000470338 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
TOP3B-215ENST00000470338 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
TOP3B-215ENST00000470338 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
TOP3B-215ENST00000470338 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
TOP3B-215ENST00000470338 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
TOP3B-215ENST00000470338 MT3P25713 68 aa3.92□□□□□ -1.78
TOP3B-215ENST00000470338 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
TOP3B-215ENST00000470338 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
TOP3B-215ENST00000470338 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
TOP3B-215ENST00000470338 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
TOP3B-215ENST00000470338 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
TOP3B-215ENST00000470338 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
TOP3B-215ENST00000470338 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
TOP3B-215ENST00000470338 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
TOP3B-215ENST00000470338 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
TOP3B-215ENST00000470338 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
TOP3B-215ENST00000470338 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
TOP3B-215ENST00000470338 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
TOP3B-215ENST00000470338 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
TOP3B-215ENST00000470338 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
TOP3B-215ENST00000470338 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
TOP3B-215ENST00000470338 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
TOP3B-215ENST00000470338 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
TOP3B-215ENST00000470338 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
TOP3B-215ENST00000470338 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
TOP3B-215ENST00000470338 INE1O15225 51 aa2.99□□□□□ -1.93
TOP3B-215ENST00000470338 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
TOP3B-215ENST00000470338 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
TOP3B-215ENST00000470338 H3BS24 57 aa2.77□□□□□ -1.97
TOP3B-215ENST00000470338 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
TOP3B-215ENST00000470338 PRM1P04553 51 aa2.54□□□□□ -2
TOP3B-215ENST00000470338 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
TOP3B-215ENST00000470338 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
TOP3B-215ENST00000470338 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
TOP3B-215ENST00000470338 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 78.6 ms