RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 A8MU10 97 aa3.32□□□□□ -1.88
NUP98-209ENST00000469881 SCGB1A1P11684 91 aa3.32□□□□□ -1.88
NUP98-209ENST00000469881 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
NUP98-209ENST00000469881 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
NUP98-209ENST00000469881 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
NUP98-209ENST00000469881 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
NUP98-209ENST00000469881 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
NUP98-209ENST00000469881 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
NUP98-209ENST00000469881 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
NUP98-209ENST00000469881 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
NUP98-209ENST00000469881 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
NUP98-209ENST00000469881 A0A1B0GV90 55 aa3.18□□□□□ -1.9
NUP98-209ENST00000469881 SPATA8Q6RVD6 105 aa3.18□□□□□ -1.9
NUP98-209ENST00000469881 SMIM20Q8N5G0 67 aa3.18□□□□□ -1.9
NUP98-209ENST00000469881 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
NUP98-209ENST00000469881 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
NUP98-209ENST00000469881 SNURFQ9Y675 71 aa3.15□□□□□ -1.91
NUP98-209ENST00000469881 J3QR89 54 aa3.14□□□□□ -1.91
NUP98-209ENST00000469881 SERP1Q9Y6X1 66 aa3.14□□□□□ -1.91
NUP98-209ENST00000469881 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
NUP98-209ENST00000469881 TNP1P09430 55 aa3.12□□□□□ -1.91
NUP98-209ENST00000469881 A0A1B0GU33 70 aa3.11□□□□□ -1.91
NUP98-209ENST00000469881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
NUP98-209ENST00000469881 COA5Q86WW8 74 aa3.09□□□□□ -1.91
NUP98-209ENST00000469881 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
NUP98-209ENST00000469881 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
NUP98-209ENST00000469881 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
NUP98-209ENST00000469881 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
NUP98-209ENST00000469881 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
NUP98-209ENST00000469881 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
NUP98-209ENST00000469881 SERP2Q8N6R1 65 aa2.97□□□□□ -1.93
NUP98-209ENST00000469881 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
NUP98-209ENST00000469881 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
NUP98-209ENST00000469881 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
NUP98-209ENST00000469881 A0A1B0GU69 56 aa2.94□□□□□ -1.94
NUP98-209ENST00000469881 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
NUP98-209ENST00000469881 K7ERU9 68 aa2.91□□□□□ -1.94
NUP98-209ENST00000469881 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
NUP98-209ENST00000469881 MT1AP04731 61 aa2.86□□□□□ -1.95
NUP98-209ENST00000469881 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
NUP98-209ENST00000469881 H7BZZ5 65 aa2.83□□□□□ -1.96
NUP98-209ENST00000469881 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
NUP98-209ENST00000469881 PSPHP1O15172 72 aa2.79□□□□□ -1.96
NUP98-209ENST00000469881 COX7CP15954 63 aa2.79□□□□□ -1.96
NUP98-209ENST00000469881 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
NUP98-209ENST00000469881 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
NUP98-209ENST00000469881 PRR15LQ9BU68 103 aa2.77□□□□□ -1.97
NUP98-209ENST00000469881 V9GYY9 64 aa2.72□□□□□ -1.97
NUP98-209ENST00000469881 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
NUP98-209ENST00000469881 UQCR11O14957 56 aa2.67□□□□□ -1.98
NUP98-209ENST00000469881 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
NUP98-209ENST00000469881 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
NUP98-209ENST00000469881 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
NUP98-209ENST00000469881 CCDC179H3BU77 68 aa2.62□□□□□ -1.99
NUP98-209ENST00000469881 ANAPC13Q9BS18 74 aa2.6□□□□□ -1.99
NUP98-209ENST00000469881 K7ERS5 55 aa2.59□□□□□ -1.99
NUP98-209ENST00000469881 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
NUP98-209ENST00000469881 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
NUP98-209ENST00000469881 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
NUP98-209ENST00000469881 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
NUP98-209ENST00000469881 RPS28P62857 69 aaKnown RBP2.47□□□□□ -2.01
NUP98-209ENST00000469881 TMEM258P61165 79 aa2.45□□□□□ -2.02
NUP98-209ENST00000469881 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
NUP98-209ENST00000469881 Q1T7F1 81 aa2.38□□□□□ -2.03
NUP98-209ENST00000469881 ROMO1P60602 79 aa2.35□□□□□ -2.03
NUP98-209ENST00000469881 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
NUP98-209ENST00000469881 A6NED7 52 aa2.33□□□□□ -2.04
NUP98-209ENST00000469881 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
NUP98-209ENST00000469881 PMAIP1Q13794 54 aa2.15□□□□□ -2.07
NUP98-209ENST00000469881 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
NUP98-209ENST00000469881 BRK1Q8WUW1 75 aa1.97□□□□□ -2.09
NUP98-209ENST00000469881 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
NUP98-209ENST00000469881 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
NUP98-209ENST00000469881 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
NUP98-209ENST00000469881 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
NUP98-209ENST00000469881 INE1O15225 51 aa1.48□□□□□ -2.17
NUP98-209ENST00000469881 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
NUP98-209ENST00000469881 PRM1P04553 51 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms