RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
PHGDH-204ENST00000469443 PRR15LQ9BU68 103 aa6.7□□□□□ -1.34
PHGDH-204ENST00000469443 KRTAP19-5Q3LI72 72 aa6.69□□□□□ -1.34
PHGDH-204ENST00000469443 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
PHGDH-204ENST00000469443 C10orf95Q9H7T3 257 aa6.61□□□□□ -1.35
PHGDH-204ENST00000469443 MT1GP13640 62 aa6.6□□□□□ -1.35
PHGDH-204ENST00000469443 TNP1P09430 55 aa6.59□□□□□ -1.35
PHGDH-204ENST00000469443 TMEM258P61165 79 aa6.56□□□□□ -1.36
PHGDH-204ENST00000469443 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
PHGDH-204ENST00000469443 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
PHGDH-204ENST00000469443 MT1LQ93083 61 aa6.51□□□□□ -1.37
PHGDH-204ENST00000469443 MT1MQ8N339 61 aa6.48□□□□□ -1.37
PHGDH-204ENST00000469443 UQCR11O14957 56 aa6.47□□□□□ -1.37
PHGDH-204ENST00000469443 GPR98Q8WXG9 6306 aa6.38□□□□□ -1.39
PHGDH-204ENST00000469443 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
PHGDH-204ENST00000469443 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
PHGDH-204ENST00000469443 PCP4P48539 62 aa6.31□□□□□ -1.4
PHGDH-204ENST00000469443 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
PHGDH-204ENST00000469443 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
PHGDH-204ENST00000469443 V9GYY9 64 aa6.22□□□□□ -1.41
PHGDH-204ENST00000469443 K7ERS5 55 aa6.21□□□□□ -1.42
PHGDH-204ENST00000469443 MT4P47944 62 aa6.21□□□□□ -1.42
PHGDH-204ENST00000469443 PSPHP1O15172 72 aa6.18□□□□□ -1.42
PHGDH-204ENST00000469443 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
PHGDH-204ENST00000469443 Q1T7F1 81 aa6.17□□□□□ -1.42
PHGDH-204ENST00000469443 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
PHGDH-204ENST00000469443 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
PHGDH-204ENST00000469443 A6NED7 52 aa5.98□□□□□ -1.45
PHGDH-204ENST00000469443 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
PHGDH-204ENST00000469443 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
PHGDH-204ENST00000469443 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
PHGDH-204ENST00000469443 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
PHGDH-204ENST00000469443 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
PHGDH-204ENST00000469443 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
PHGDH-204ENST00000469443 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
PHGDH-204ENST00000469443 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
PHGDH-204ENST00000469443 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
PHGDH-204ENST00000469443 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
PHGDH-204ENST00000469443 ROMO1P60602 79 aa5.78□□□□□ -1.48
PHGDH-204ENST00000469443 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
PHGDH-204ENST00000469443 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
PHGDH-204ENST00000469443 MT1AP04731 61 aa5.54□□□□□ -1.52
PHGDH-204ENST00000469443 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.54□□□□□ -1.52
PHGDH-204ENST00000469443 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
PHGDH-204ENST00000469443 KRTAP9-6A8MVA2 160 aa5.47□□□□□ -1.53
PHGDH-204ENST00000469443 KRTAP5-2Q701N4 177 aa5.42□□□□□ -1.54
PHGDH-204ENST00000469443 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
PHGDH-204ENST00000469443 KRTAP5-11Q6L8G4 156 aa5.32□□□□□ -1.56
PHGDH-204ENST00000469443 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
PHGDH-204ENST00000469443 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
PHGDH-204ENST00000469443 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
PHGDH-204ENST00000469443 MT3P25713 68 aa5.07□□□□□ -1.6
PHGDH-204ENST00000469443 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
PHGDH-204ENST00000469443 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
PHGDH-204ENST00000469443 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
PHGDH-204ENST00000469443 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
PHGDH-204ENST00000469443 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
PHGDH-204ENST00000469443 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
PHGDH-204ENST00000469443 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
PHGDH-204ENST00000469443 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
PHGDH-204ENST00000469443 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
PHGDH-204ENST00000469443 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
PHGDH-204ENST00000469443 KRTAP4-4Q9BYR3 166 aa4.58□□□□□ -1.68
PHGDH-204ENST00000469443 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
PHGDH-204ENST00000469443 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
PHGDH-204ENST00000469443 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
PHGDH-204ENST00000469443 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
PHGDH-204ENST00000469443 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
PHGDH-204ENST00000469443 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
PHGDH-204ENST00000469443 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
PHGDH-204ENST00000469443 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
PHGDH-204ENST00000469443 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
PHGDH-204ENST00000469443 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
PHGDH-204ENST00000469443 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
PHGDH-204ENST00000469443 INE1O15225 51 aa3.05□□□□□ -1.92
PHGDH-204ENST00000469443 PRM1P04553 51 aa2.95□□□□□ -1.94
PHGDH-204ENST00000469443 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
PHGDH-204ENST00000469443 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms