RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 A8MU10 97 aa2.85□□□□□ -1.95
SNRPD3-205ENST00000468770 K7ERS5 55 aa2.84□□□□□ -1.95
SNRPD3-205ENST00000468770 SPRR2DP22532 72 aa2.83□□□□□ -1.96
SNRPD3-205ENST00000468770 SPATA8Q6RVD6 105 aa2.82□□□□□ -1.96
SNRPD3-205ENST00000468770 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
SNRPD3-205ENST00000468770 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
SNRPD3-205ENST00000468770 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
SNRPD3-205ENST00000468770 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
SNRPD3-205ENST00000468770 A0A1B0GU33 70 aa2.79□□□□□ -1.96
SNRPD3-205ENST00000468770 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
SNRPD3-205ENST00000468770 A0A0D9SG42 100 aa2.76□□□□□ -1.97
SNRPD3-205ENST00000468770 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
SNRPD3-205ENST00000468770 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
SNRPD3-205ENST00000468770 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
SNRPD3-205ENST00000468770 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
SNRPD3-205ENST00000468770 ROMO1P60602 79 aa2.69□□□□□ -1.98
SNRPD3-205ENST00000468770 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
SNRPD3-205ENST00000468770 MT1EP04732 61 aa2.67□□□□□ -1.98
SNRPD3-205ENST00000468770 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
SNRPD3-205ENST00000468770 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
SNRPD3-205ENST00000468770 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.99
SNRPD3-205ENST00000468770 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
SNRPD3-205ENST00000468770 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
SNRPD3-205ENST00000468770 MT1GP13640 62 aa2.6□□□□□ -1.99
SNRPD3-205ENST00000468770 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
SNRPD3-205ENST00000468770 TNP1P09430 55 aa2.58□□□□□ -2
SNRPD3-205ENST00000468770 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
SNRPD3-205ENST00000468770 LCE3AQ5TA76 89 aa2.55□□□□□ -2
SNRPD3-205ENST00000468770 MT1LQ93083 61 aa2.55□□□□□ -2
SNRPD3-205ENST00000468770 MT1MQ8N339 61 aa2.54□□□□□ -2
SNRPD3-205ENST00000468770 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
SNRPD3-205ENST00000468770 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
SNRPD3-205ENST00000468770 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
SNRPD3-205ENST00000468770 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
SNRPD3-205ENST00000468770 MT4P47944 62 aa2.48□□□□□ -2.01
SNRPD3-205ENST00000468770 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
SNRPD3-205ENST00000468770 KRTAP15-1Q3LI76 137 aa2.45□□□□□ -2.02
SNRPD3-205ENST00000468770 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
SNRPD3-205ENST00000468770 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
SNRPD3-205ENST00000468770 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
SNRPD3-205ENST00000468770 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
SNRPD3-205ENST00000468770 KRTAP23-1A1A580 65 aa2.32□□□□□ -2.04
SNRPD3-205ENST00000468770 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
SNRPD3-205ENST00000468770 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SNRPD3-205ENST00000468770 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
SNRPD3-205ENST00000468770 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
SNRPD3-205ENST00000468770 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
SNRPD3-205ENST00000468770 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
SNRPD3-205ENST00000468770 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
SNRPD3-205ENST00000468770 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
SNRPD3-205ENST00000468770 MT1AP04731 61 aa2.17□□□□□ -2.06
SNRPD3-205ENST00000468770 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
SNRPD3-205ENST00000468770 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
SNRPD3-205ENST00000468770 INE1O15225 51 aa2.13□□□□□ -2.07
SNRPD3-205ENST00000468770 KRTAP9-6A8MVA2 160 aa2.12□□□□□ -2.07
SNRPD3-205ENST00000468770 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
SNRPD3-205ENST00000468770 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
SNRPD3-205ENST00000468770 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
SNRPD3-205ENST00000468770 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
SNRPD3-205ENST00000468770 MT3P25713 68 aa2□□□□□ -2.09
SNRPD3-205ENST00000468770 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
SNRPD3-205ENST00000468770 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
SNRPD3-205ENST00000468770 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
SNRPD3-205ENST00000468770 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
SNRPD3-205ENST00000468770 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
SNRPD3-205ENST00000468770 LCE1EQ5T753 118 aa1.84□□□□□ -2.11
SNRPD3-205ENST00000468770 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
SNRPD3-205ENST00000468770 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
SNRPD3-205ENST00000468770 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
SNRPD3-205ENST00000468770 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
SNRPD3-205ENST00000468770 LCE3EQ5T5B0 92 aa1.54□□□□□ -2.16
SNRPD3-205ENST00000468770 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
SNRPD3-205ENST00000468770 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
SNRPD3-205ENST00000468770 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
SNRPD3-205ENST00000468770 PRM1P04553 51 aa1.36□□□□□ -2.19
SNRPD3-205ENST00000468770 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
SNRPD3-205ENST00000468770 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
SNRPD3-205ENST00000468770 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 77.5 ms