RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 A8MU10 97 aa6.32□□□□□ -1.4
SSBP1-207ENST00000468267 KRTAP19-3Q7Z4W3 81 aa6.31□□□□□ -1.4
SSBP1-207ENST00000468267 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
SSBP1-207ENST00000468267 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
SSBP1-207ENST00000468267 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
SSBP1-207ENST00000468267 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
SSBP1-207ENST00000468267 TMEM258P61165 79 aa6.21□□□□□ -1.42
SSBP1-207ENST00000468267 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
SSBP1-207ENST00000468267 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
SSBP1-207ENST00000468267 MT1GP13640 62 aa6.18□□□□□ -1.42
SSBP1-207ENST00000468267 TNP1P09430 55 aa6.15□□□□□ -1.42
SSBP1-207ENST00000468267 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
SSBP1-207ENST00000468267 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
SSBP1-207ENST00000468267 MT1LQ93083 61 aa6.09□□□□□ -1.43
SSBP1-207ENST00000468267 MT1MQ8N339 61 aa6.06□□□□□ -1.44
SSBP1-207ENST00000468267 UQCR11O14957 56 aa6.04□□□□□ -1.44
SSBP1-207ENST00000468267 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
SSBP1-207ENST00000468267 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.46
SSBP1-207ENST00000468267 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
SSBP1-207ENST00000468267 GPR98Q8WXG9 6306 aa5.88□□□□□ -1.47
SSBP1-207ENST00000468267 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.87□□□□□ -1.47
SSBP1-207ENST00000468267 V9GYY9 64 aa5.86□□□□□ -1.47
SSBP1-207ENST00000468267 PCP4P48539 62 aa5.85□□□□□ -1.47
SSBP1-207ENST00000468267 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
SSBP1-207ENST00000468267 MT4P47944 62 aa5.81□□□□□ -1.48
SSBP1-207ENST00000468267 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
SSBP1-207ENST00000468267 Q1T7F1 81 aa5.8□□□□□ -1.48
SSBP1-207ENST00000468267 K7ERS5 55 aa5.79□□□□□ -1.48
SSBP1-207ENST00000468267 KRTAP5-4Q6L8H1 288 aa5.79□□□□□ -1.48
SSBP1-207ENST00000468267 PSPHP1O15172 72 aa5.78□□□□□ -1.48
SSBP1-207ENST00000468267 KRTAP5-11Q6L8G4 156 aa5.75□□□□□ -1.49
SSBP1-207ENST00000468267 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
SSBP1-207ENST00000468267 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
SSBP1-207ENST00000468267 A6NED7 52 aa5.59□□□□□ -1.51
SSBP1-207ENST00000468267 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-207ENST00000468267 A0A0A0MQY5 61 aa5.5□□□□□ -1.53
SSBP1-207ENST00000468267 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
SSBP1-207ENST00000468267 KRTAP5-10Q6L8G5 202 aa5.46□□□□□ -1.54
SSBP1-207ENST00000468267 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
SSBP1-207ENST00000468267 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
SSBP1-207ENST00000468267 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
SSBP1-207ENST00000468267 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
SSBP1-207ENST00000468267 ROMO1P60602 79 aa5.4□□□□□ -1.54
SSBP1-207ENST00000468267 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
SSBP1-207ENST00000468267 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
SSBP1-207ENST00000468267 KRTAP5-7Q6L8G8 165 aa5.25□□□□□ -1.57
SSBP1-207ENST00000468267 MT1AP04731 61 aa5.18□□□□□ -1.58
SSBP1-207ENST00000468267 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
SSBP1-207ENST00000468267 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
SSBP1-207ENST00000468267 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
SSBP1-207ENST00000468267 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
SSBP1-207ENST00000468267 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
SSBP1-207ENST00000468267 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
SSBP1-207ENST00000468267 KRTAP4-4Q9BYR3 166 aa4.88□□□□□ -1.63
SSBP1-207ENST00000468267 MT3P25713 68 aa4.84□□□□□ -1.63
SSBP1-207ENST00000468267 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
SSBP1-207ENST00000468267 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
SSBP1-207ENST00000468267 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
SSBP1-207ENST00000468267 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
SSBP1-207ENST00000468267 AHNAKQ09666 5890 aaKnown RBP4.62□□□□□ -1.67
SSBP1-207ENST00000468267 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
SSBP1-207ENST00000468267 MUC5ACP98088 5654 aa4.59□□□□□ -1.68
SSBP1-207ENST00000468267 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
SSBP1-207ENST00000468267 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
SSBP1-207ENST00000468267 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
SSBP1-207ENST00000468267 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
SSBP1-207ENST00000468267 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
SSBP1-207ENST00000468267 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
SSBP1-207ENST00000468267 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SSBP1-207ENST00000468267 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
SSBP1-207ENST00000468267 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
SSBP1-207ENST00000468267 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
SSBP1-207ENST00000468267 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
SSBP1-207ENST00000468267 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SSBP1-207ENST00000468267 PRM1P04553 51 aa2.76□□□□□ -1.97
SSBP1-207ENST00000468267 INE1O15225 51 aa2.68□□□□□ -1.98
SSBP1-207ENST00000468267 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
SSBP1-207ENST00000468267 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms