RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SMIM26A0A096LP01 95 aa5.94□□□□□ -1.46
TRIM56-203ENST00000467847 TNP1P09430 55 aa5.91□□□□□ -1.46
TRIM56-203ENST00000467847 A8MU10 97 aa5.9□□□□□ -1.46
TRIM56-203ENST00000467847 A0A1B0GU69 56 aa5.87□□□□□ -1.47
TRIM56-203ENST00000467847 COX7CP15954 63 aa5.82□□□□□ -1.48
TRIM56-203ENST00000467847 H7BZZ5 65 aa5.81□□□□□ -1.48
TRIM56-203ENST00000467847 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
TRIM56-203ENST00000467847 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
TRIM56-203ENST00000467847 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
TRIM56-203ENST00000467847 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
TRIM56-203ENST00000467847 ANAPC13Q9BS18 74 aa5.67□□□□□ -1.5
TRIM56-203ENST00000467847 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
TRIM56-203ENST00000467847 PRR15LQ9BU68 103 aa5.61□□□□□ -1.51
TRIM56-203ENST00000467847 CCDC179H3BU77 68 aa5.56□□□□□ -1.52
TRIM56-203ENST00000467847 PCP4P48539 62 aa5.56□□□□□ -1.52
TRIM56-203ENST00000467847 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
TRIM56-203ENST00000467847 AHNAKQ09666 5890 aaKnown RBP5.48□□□□□ -1.53
TRIM56-203ENST00000467847 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.54
TRIM56-203ENST00000467847 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
TRIM56-203ENST00000467847 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
TRIM56-203ENST00000467847 UQCR11O14957 56 aa5.4□□□□□ -1.54
TRIM56-203ENST00000467847 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
TRIM56-203ENST00000467847 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
TRIM56-203ENST00000467847 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
TRIM56-203ENST00000467847 TMEM258P61165 79 aa5.38□□□□□ -1.55
TRIM56-203ENST00000467847 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
TRIM56-203ENST00000467847 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
TRIM56-203ENST00000467847 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
TRIM56-203ENST00000467847 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
TRIM56-203ENST00000467847 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
TRIM56-203ENST00000467847 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
TRIM56-203ENST00000467847 K7ERS5 55 aa5.23□□□□□ -1.57
TRIM56-203ENST00000467847 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
TRIM56-203ENST00000467847 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
TRIM56-203ENST00000467847 MT1AP04731 61 aa5.19□□□□□ -1.58
TRIM56-203ENST00000467847 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
TRIM56-203ENST00000467847 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
TRIM56-203ENST00000467847 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
TRIM56-203ENST00000467847 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
TRIM56-203ENST00000467847 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
TRIM56-203ENST00000467847 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
TRIM56-203ENST00000467847 PSPHP1O15172 72 aa5□□□□□ -1.61
TRIM56-203ENST00000467847 Q1T7F1 81 aa4.99□□□□□ -1.61
TRIM56-203ENST00000467847 V9GYY9 64 aa4.98□□□□□ -1.61
TRIM56-203ENST00000467847 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
TRIM56-203ENST00000467847 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
TRIM56-203ENST00000467847 A6NED7 52 aa4.81□□□□□ -1.64
TRIM56-203ENST00000467847 ROMO1P60602 79 aa4.8□□□□□ -1.64
TRIM56-203ENST00000467847 MT3P25713 68 aa4.77□□□□□ -1.65
TRIM56-203ENST00000467847 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
TRIM56-203ENST00000467847 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
TRIM56-203ENST00000467847 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
TRIM56-203ENST00000467847 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
TRIM56-203ENST00000467847 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
TRIM56-203ENST00000467847 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
TRIM56-203ENST00000467847 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
TRIM56-203ENST00000467847 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
TRIM56-203ENST00000467847 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
TRIM56-203ENST00000467847 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
TRIM56-203ENST00000467847 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
TRIM56-203ENST00000467847 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
TRIM56-203ENST00000467847 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
TRIM56-203ENST00000467847 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
TRIM56-203ENST00000467847 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
TRIM56-203ENST00000467847 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
TRIM56-203ENST00000467847 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
TRIM56-203ENST00000467847 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
TRIM56-203ENST00000467847 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
TRIM56-203ENST00000467847 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
TRIM56-203ENST00000467847 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
TRIM56-203ENST00000467847 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
TRIM56-203ENST00000467847 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
TRIM56-203ENST00000467847 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
TRIM56-203ENST00000467847 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
TRIM56-203ENST00000467847 INE1O15225 51 aa2.65□□□□□ -1.99
TRIM56-203ENST00000467847 H3BS24 57 aa2.56□□□□□ -2
TRIM56-203ENST00000467847 PRM1P04553 51 aa2.44□□□□□ -2.02
TRIM56-203ENST00000467847 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 137.4 ms