RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
GAPDH-207ENST00000466588 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
GAPDH-207ENST00000466588 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
GAPDH-207ENST00000466588 SPRR2EP22531 72 aa4.67□□□□□ -1.66
GAPDH-207ENST00000466588 SPRR2BP35325 72 aa4.67□□□□□ -1.66
GAPDH-207ENST00000466588 SPRR2AP35326 72 aa4.67□□□□□ -1.66
GAPDH-207ENST00000466588 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
GAPDH-207ENST00000466588 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
GAPDH-207ENST00000466588 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
GAPDH-207ENST00000466588 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
GAPDH-207ENST00000466588 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
GAPDH-207ENST00000466588 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
GAPDH-207ENST00000466588 MT1XP80297 61 aa4.54□□□□□ -1.68
GAPDH-207ENST00000466588 SPRR2DP22532 72 aa4.53□□□□□ -1.69
GAPDH-207ENST00000466588 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
GAPDH-207ENST00000466588 ROMO1P60602 79 aa4.48□□□□□ -1.69
GAPDH-207ENST00000466588 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
GAPDH-207ENST00000466588 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
GAPDH-207ENST00000466588 TNP1P09430 55 aa4.44□□□□□ -1.7
GAPDH-207ENST00000466588 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
GAPDH-207ENST00000466588 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
GAPDH-207ENST00000466588 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
GAPDH-207ENST00000466588 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
GAPDH-207ENST00000466588 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
GAPDH-207ENST00000466588 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
GAPDH-207ENST00000466588 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
GAPDH-207ENST00000466588 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
GAPDH-207ENST00000466588 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
GAPDH-207ENST00000466588 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
GAPDH-207ENST00000466588 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
GAPDH-207ENST00000466588 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
GAPDH-207ENST00000466588 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
GAPDH-207ENST00000466588 MT1EP04732 61 aa4.05□□□□□ -1.76
GAPDH-207ENST00000466588 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
GAPDH-207ENST00000466588 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
GAPDH-207ENST00000466588 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
GAPDH-207ENST00000466588 MT4P47944 62 aa3.98□□□□□ -1.77
GAPDH-207ENST00000466588 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
GAPDH-207ENST00000466588 MT1GP13640 62 aa3.93□□□□□ -1.78
GAPDH-207ENST00000466588 MT1LQ93083 61 aa3.9□□□□□ -1.78
GAPDH-207ENST00000466588 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
GAPDH-207ENST00000466588 MT1MQ8N339 61 aa3.88□□□□□ -1.79
GAPDH-207ENST00000466588 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
GAPDH-207ENST00000466588 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
GAPDH-207ENST00000466588 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
GAPDH-207ENST00000466588 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
GAPDH-207ENST00000466588 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
GAPDH-207ENST00000466588 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
GAPDH-207ENST00000466588 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
GAPDH-207ENST00000466588 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
GAPDH-207ENST00000466588 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
GAPDH-207ENST00000466588 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
GAPDH-207ENST00000466588 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
GAPDH-207ENST00000466588 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
GAPDH-207ENST00000466588 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
GAPDH-207ENST00000466588 INE1O15225 51 aa3.4□□□□□ -1.86
GAPDH-207ENST00000466588 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
GAPDH-207ENST00000466588 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
GAPDH-207ENST00000466588 LCE1EQ5T753 118 aa3.34□□□□□ -1.88
GAPDH-207ENST00000466588 MT1AP04731 61 aa3.33□□□□□ -1.88
GAPDH-207ENST00000466588 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
GAPDH-207ENST00000466588 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
GAPDH-207ENST00000466588 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
GAPDH-207ENST00000466588 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
GAPDH-207ENST00000466588 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
GAPDH-207ENST00000466588 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.9
GAPDH-207ENST00000466588 MT3P25713 68 aa3.06□□□□□ -1.92
GAPDH-207ENST00000466588 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
GAPDH-207ENST00000466588 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
GAPDH-207ENST00000466588 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
GAPDH-207ENST00000466588 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
GAPDH-207ENST00000466588 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
GAPDH-207ENST00000466588 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
GAPDH-207ENST00000466588 PRM1P04553 51 aa2.3□□□□□ -2.04
GAPDH-207ENST00000466588 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
GAPDH-207ENST00000466588 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
GAPDH-207ENST00000466588 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
GAPDH-207ENST00000466588 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 730.6 ms