RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 KRTAP5-4Q6L8H1 288 aa6.63□□□□□ -1.35
COL9A3-206ENST00000466532 ANAPC13Q9BS18 74 aa6.57□□□□□ -1.36
COL9A3-206ENST00000466532 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
COL9A3-206ENST00000466532 KRTAP5-10Q6L8G5 202 aa6.5□□□□□ -1.37
COL9A3-206ENST00000466532 CCDC179H3BU77 68 aa6.47□□□□□ -1.37
COL9A3-206ENST00000466532 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
COL9A3-206ENST00000466532 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
COL9A3-206ENST00000466532 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
COL9A3-206ENST00000466532 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
COL9A3-206ENST00000466532 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
COL9A3-206ENST00000466532 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
COL9A3-206ENST00000466532 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
COL9A3-206ENST00000466532 ATP5EP56381 51 aaPredicted RBP6.27□□□□□ -1.41
COL9A3-206ENST00000466532 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
COL9A3-206ENST00000466532 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
COL9A3-206ENST00000466532 UQCR11O14957 56 aa6.2□□□□□ -1.42
COL9A3-206ENST00000466532 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
COL9A3-206ENST00000466532 TMEM258P61165 79 aa6.17□□□□□ -1.42
COL9A3-206ENST00000466532 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
COL9A3-206ENST00000466532 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
COL9A3-206ENST00000466532 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
COL9A3-206ENST00000466532 H3BS24 57 aa6.06□□□□□ -1.44
COL9A3-206ENST00000466532 PCP4P48539 62 aa6.04□□□□□ -1.44
COL9A3-206ENST00000466532 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
COL9A3-206ENST00000466532 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
COL9A3-206ENST00000466532 K7ERS5 55 aa5.98□□□□□ -1.45
COL9A3-206ENST00000466532 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
COL9A3-206ENST00000466532 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
COL9A3-206ENST00000466532 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
COL9A3-206ENST00000466532 PSPHP1O15172 72 aa5.82□□□□□ -1.48
COL9A3-206ENST00000466532 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
COL9A3-206ENST00000466532 V9GYY9 64 aa5.79□□□□□ -1.48
COL9A3-206ENST00000466532 MT1AP04731 61 aa5.77□□□□□ -1.49
COL9A3-206ENST00000466532 Q1T7F1 81 aa5.77□□□□□ -1.49
COL9A3-206ENST00000466532 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
COL9A3-206ENST00000466532 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
COL9A3-206ENST00000466532 RPS28P62857 69 aaKnown RBP5.69□□□□□ -1.5
COL9A3-206ENST00000466532 A6NED7 52 aa5.62□□□□□ -1.51
COL9A3-206ENST00000466532 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
COL9A3-206ENST00000466532 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
COL9A3-206ENST00000466532 KRTAP5-8O75690 187 aa5.6□□□□□ -1.51
COL9A3-206ENST00000466532 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
COL9A3-206ENST00000466532 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
COL9A3-206ENST00000466532 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
COL9A3-206ENST00000466532 AHNAKQ09666 5890 aaKnown RBP5.52□□□□□ -1.53
COL9A3-206ENST00000466532 ROMO1P60602 79 aa5.52□□□□□ -1.53
COL9A3-206ENST00000466532 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
COL9A3-206ENST00000466532 MUC5ACP98088 5654 aa5.48□□□□□ -1.53
COL9A3-206ENST00000466532 MUC5BQ9HC84 5762 aaPredicted RBP5.48□□□□□ -1.53
COL9A3-206ENST00000466532 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
COL9A3-206ENST00000466532 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
COL9A3-206ENST00000466532 MT3P25713 68 aa5.3□□□□□ -1.56
COL9A3-206ENST00000466532 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
COL9A3-206ENST00000466532 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
COL9A3-206ENST00000466532 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
COL9A3-206ENST00000466532 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
COL9A3-206ENST00000466532 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
COL9A3-206ENST00000466532 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
COL9A3-206ENST00000466532 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
COL9A3-206ENST00000466532 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
COL9A3-206ENST00000466532 PRAC1Q96KF2 57 aa4.53□□□□□ -1.68
COL9A3-206ENST00000466532 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
COL9A3-206ENST00000466532 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
COL9A3-206ENST00000466532 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
COL9A3-206ENST00000466532 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
COL9A3-206ENST00000466532 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
COL9A3-206ENST00000466532 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
COL9A3-206ENST00000466532 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
COL9A3-206ENST00000466532 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
COL9A3-206ENST00000466532 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
COL9A3-206ENST00000466532 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
COL9A3-206ENST00000466532 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
COL9A3-206ENST00000466532 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
COL9A3-206ENST00000466532 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
COL9A3-206ENST00000466532 INE1O15225 51 aa3.03□□□□□ -1.92
COL9A3-206ENST00000466532 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
COL9A3-206ENST00000466532 PRM1P04553 51 aa2.81□□□□□ -1.96
COL9A3-206ENST00000466532 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 92.6 ms