RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

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Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
SCAF11-205ENST00000465950 MT1EP04732 61 aa3.14□□□□□ -1.91
SCAF11-205ENST00000465950 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
SCAF11-205ENST00000465950 TNXBP22105 4242 aa3.1□□□□□ -1.91
SCAF11-205ENST00000465950 MT1MQ8N339 61 aa3.09□□□□□ -1.91
SCAF11-205ENST00000465950 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
SCAF11-205ENST00000465950 KRTAP4-8Q9BYQ9 185 aa3.07□□□□□ -1.92
SCAF11-205ENST00000465950 MUC17Q685J3 4493 aa3.06□□□□□ -1.92
SCAF11-205ENST00000465950 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SCAF11-205ENST00000465950 HYDINQ4G0P3 5121 aa3.03□□□□□ -1.92
SCAF11-205ENST00000465950 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SCAF11-205ENST00000465950 MT1AP04731 61 aa2.95□□□□□ -1.94
SCAF11-205ENST00000465950 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
SCAF11-205ENST00000465950 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
SCAF11-205ENST00000465950 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
SCAF11-205ENST00000465950 UBR4Q5T4S7 5183 aa2.86□□□□□ -1.95
SCAF11-205ENST00000465950 HMCN2Q8NDA2 5059 aa2.86□□□□□ -1.95
SCAF11-205ENST00000465950 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SCAF11-205ENST00000465950 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
SCAF11-205ENST00000465950 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
SCAF11-205ENST00000465950 NEBP20929 6669 aa2.83□□□□□ -1.96
SCAF11-205ENST00000465950 FLGP20930 4061 aaPredicted RBP2.78□□□□□ -1.96
SCAF11-205ENST00000465950 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
SCAF11-205ENST00000465950 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
SCAF11-205ENST00000465950 KRTAP4-9Q9BYQ8 210 aa2.73□□□□□ -1.97
SCAF11-205ENST00000465950 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
SCAF11-205ENST00000465950 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
SCAF11-205ENST00000465950 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
SCAF11-205ENST00000465950 LPAP08519 4548 aa2.68□□□□□ -1.98
SCAF11-205ENST00000465950 FSIP2Q5CZC0 6907 aa2.63□□□□□ -1.99
SCAF11-205ENST00000465950 KRTAP4-7Q9BYR0 210 aa2.62□□□□□ -1.99
SCAF11-205ENST00000465950 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SCAF11-205ENST00000465950 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
SCAF11-205ENST00000465950 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SCAF11-205ENST00000465950 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
SCAF11-205ENST00000465950 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
SCAF11-205ENST00000465950 SSPOA2VEC9 5147 aa2.55□□□□□ -2
SCAF11-205ENST00000465950 LOC100996750A0A140TA64 210 aa2.5□□□□□ -2.01
SCAF11-205ENST00000465950 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
SCAF11-205ENST00000465950 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
SCAF11-205ENST00000465950 MUC2Q02817 5179 aa2.45□□□□□ -2.02
SCAF11-205ENST00000465950 USH2AO75445 5202 aa2.44□□□□□ -2.02
SCAF11-205ENST00000465950 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
SCAF11-205ENST00000465950 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
SCAF11-205ENST00000465950 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
SCAF11-205ENST00000465950 PRM1P04553 51 aa2.35□□□□□ -2.03
SCAF11-205ENST00000465950 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
SCAF11-205ENST00000465950 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
SCAF11-205ENST00000465950 KMT2DO14686 5537 aa2.28□□□□□ -2.04
SCAF11-205ENST00000465950 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
SCAF11-205ENST00000465950 KRTAP4-6Q9BYQ5 205 aa2.25□□□□□ -2.05
SCAF11-205ENST00000465950 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
SCAF11-205ENST00000465950 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
SCAF11-205ENST00000465950 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
SCAF11-205ENST00000465950 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
SCAF11-205ENST00000465950 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
SCAF11-205ENST00000465950 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
SCAF11-205ENST00000465950 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
SCAF11-205ENST00000465950 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
SCAF11-205ENST00000465950 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
SCAF11-205ENST00000465950 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
SCAF11-205ENST00000465950 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
SCAF11-205ENST00000465950 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
SCAF11-205ENST00000465950 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
SCAF11-205ENST00000465950 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
SCAF11-205ENST00000465950 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
SCAF11-205ENST00000465950 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
SCAF11-205ENST00000465950 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
SCAF11-205ENST00000465950 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
SCAF11-205ENST00000465950 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
SCAF11-205ENST00000465950 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
SCAF11-205ENST00000465950 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.14
SCAF11-205ENST00000465950 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
SCAF11-205ENST00000465950 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
SCAF11-205ENST00000465950 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SCAF11-205ENST00000465950 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SCAF11-205ENST00000465950 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 52.7 ms