RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
TOM1-213ENST00000465529 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
TOM1-213ENST00000465529 TMEM258P61165 79 aa5.98□□□□□ -1.45
TOM1-213ENST00000465529 MT4P47944 62 aa5.94□□□□□ -1.46
TOM1-213ENST00000465529 HMCN1Q96RW7 5635 aa5.93□□□□□ -1.46
TOM1-213ENST00000465529 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
TOM1-213ENST00000465529 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
TOM1-213ENST00000465529 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
TOM1-213ENST00000465529 UQCR11O14957 56 aa5.83□□□□□ -1.48
TOM1-213ENST00000465529 KRTAP5-4Q6L8H1 288 aa5.83□□□□□ -1.48
TOM1-213ENST00000465529 RPS28P62857 69 aaKnown RBP5.8□□□□□ -1.48
TOM1-213ENST00000465529 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
TOM1-213ENST00000465529 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
TOM1-213ENST00000465529 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
TOM1-213ENST00000465529 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
TOM1-213ENST00000465529 PSPHP1O15172 72 aa5.62□□□□□ -1.51
TOM1-213ENST00000465529 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
TOM1-213ENST00000465529 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
TOM1-213ENST00000465529 V9GYY9 64 aa5.58□□□□□ -1.52
TOM1-213ENST00000465529 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
TOM1-213ENST00000465529 K7ERS5 55 aa5.56□□□□□ -1.52
TOM1-213ENST00000465529 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
TOM1-213ENST00000465529 Q1T7F1 81 aa5.52□□□□□ -1.53
TOM1-213ENST00000465529 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
TOM1-213ENST00000465529 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
TOM1-213ENST00000465529 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
TOM1-213ENST00000465529 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
TOM1-213ENST00000465529 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
TOM1-213ENST00000465529 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
TOM1-213ENST00000465529 A6NED7 52 aa5.38□□□□□ -1.55
TOM1-213ENST00000465529 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
TOM1-213ENST00000465529 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
TOM1-213ENST00000465529 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
TOM1-213ENST00000465529 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
TOM1-213ENST00000465529 ROMO1P60602 79 aa5.23□□□□□ -1.57
TOM1-213ENST00000465529 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
TOM1-213ENST00000465529 MT1AP04731 61 aa5.18□□□□□ -1.58
TOM1-213ENST00000465529 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
TOM1-213ENST00000465529 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
TOM1-213ENST00000465529 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
TOM1-213ENST00000465529 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
TOM1-213ENST00000465529 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
TOM1-213ENST00000465529 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
TOM1-213ENST00000465529 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
TOM1-213ENST00000465529 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
TOM1-213ENST00000465529 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
TOM1-213ENST00000465529 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
TOM1-213ENST00000465529 SVIPQ8NHG7 77 aa4.75□□□□□ -1.65
TOM1-213ENST00000465529 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
TOM1-213ENST00000465529 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
TOM1-213ENST00000465529 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
TOM1-213ENST00000465529 MT3P25713 68 aa4.71□□□□□ -1.66
TOM1-213ENST00000465529 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
TOM1-213ENST00000465529 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
TOM1-213ENST00000465529 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
TOM1-213ENST00000465529 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
TOM1-213ENST00000465529 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
TOM1-213ENST00000465529 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
TOM1-213ENST00000465529 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
TOM1-213ENST00000465529 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
TOM1-213ENST00000465529 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
TOM1-213ENST00000465529 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
TOM1-213ENST00000465529 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
TOM1-213ENST00000465529 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
TOM1-213ENST00000465529 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
TOM1-213ENST00000465529 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
TOM1-213ENST00000465529 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
TOM1-213ENST00000465529 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
TOM1-213ENST00000465529 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
TOM1-213ENST00000465529 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
TOM1-213ENST00000465529 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
TOM1-213ENST00000465529 H3BS24 57 aa3.24□□□□□ -1.89
TOM1-213ENST00000465529 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
TOM1-213ENST00000465529 INE1O15225 51 aa3.12□□□□□ -1.91
TOM1-213ENST00000465529 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
TOM1-213ENST00000465529 PRM1P04553 51 aa2.71□□□□□ -1.98
TOM1-213ENST00000465529 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
TOM1-213ENST00000465529 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 94.4 ms