RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TRPM2O94759 1503 aa-1.73□□□□□ -2.69
NUCKS1-202ENST00000464938 NFAT5O94916 1531 aa-1.74□□□□□ -2.69
NUCKS1-202ENST00000464938 PCNTO95613 3336 aa-1.75□□□□□ -2.69
NUCKS1-202ENST00000464938 CEP250Q9BV73 2442 aa-1.76□□□□□ -2.69
NUCKS1-202ENST00000464938 ABCC8Q09428 1581 aa-1.76□□□□□ -2.69
NUCKS1-202ENST00000464938 CLTCL1P53675 1640 aa-1.76□□□□□ -2.69
NUCKS1-202ENST00000464938 DDX60Q8IY21 1712 aaKnown RBP-1.76□□□□□ -2.69
NUCKS1-202ENST00000464938 MT1FP04733 61 aa-1.76□□□□□ -2.69
NUCKS1-202ENST00000464938 FANCD2Q9BXW9 1451 aa-1.77□□□□□ -2.69
NUCKS1-202ENST00000464938 DMDP11532 3685 aa-1.78□□□□□ -2.69
NUCKS1-202ENST00000464938 SZT2Q5T011 3432 aa-1.82□□□□□ -2.7
NUCKS1-202ENST00000464938 CMC2Q9NRP2 79 aa-1.83□□□□□ -2.7
NUCKS1-202ENST00000464938 SPEGQ15772 3267 aa-1.84□□□□□ -2.7
NUCKS1-202ENST00000464938 NDUFA1O15239 70 aa-1.86□□□□□ -2.71
NUCKS1-202ENST00000464938 CEP350Q5VT06 3117 aa-1.87□□□□□ -2.71
NUCKS1-202ENST00000464938 WDFY4Q6ZS81 3184 aa-1.88□□□□□ -2.71
NUCKS1-202ENST00000464938 SMIM31A0A1B0GVY4 71 aa-1.88□□□□□ -2.71
NUCKS1-202ENST00000464938 EP400Q96L91 3159 aa-1.98□□□□□ -2.73
NUCKS1-202ENST00000464938 MUC3AQ02505 3323 aa-1.99□□□□□ -2.73
NUCKS1-202ENST00000464938 CENPEQ02224 2701 aa-1.99□□□□□ -2.73
NUCKS1-202ENST00000464938 ERICH3Q5RHP9 1530 aa-2□□□□□ -2.73
NUCKS1-202ENST00000464938 KRTAP19-6Q3LI70 58 aa-2.01□□□□□ -2.73
NUCKS1-202ENST00000464938 LINC01590Q5TEZ4 76 aa-2.03□□□□□ -2.73
NUCKS1-202ENST00000464938 TOMM7Q9P0U1 55 aa-2.03□□□□□ -2.73
NUCKS1-202ENST00000464938 DCHS1Q96JQ0 3298 aa-2.04□□□□□ -2.74
NUCKS1-202ENST00000464938 DNAH12Q6ZR08 3092 aa-2.06□□□□□ -2.74
NUCKS1-202ENST00000464938 RHPN1-AS1Q9BWJ2 59 aa-2.07□□□□□ -2.74
NUCKS1-202ENST00000464938 SAMD9LQ8IVG5 1584 aa-2.07□□□□□ -2.74
NUCKS1-202ENST00000464938 DUOX1Q9NRD9 1551 aa-2.07□□□□□ -2.74
NUCKS1-202ENST00000464938 MKI67P46013 3256 aaKnown RBP-2.09□□□□□ -2.74
NUCKS1-202ENST00000464938 XIRP2A4UGR9 3374 aa-2.09□□□□□ -2.74
NUCKS1-202ENST00000464938 SNRPGP15A8MWD9 76 aa-2.11□□□□□ -2.75
NUCKS1-202ENST00000464938 DEFB133Q30KQ1 61 aa-2.12□□□□□ -2.75
NUCKS1-202ENST00000464938 USP34Q70CQ2 3546 aa-2.13□□□□□ -2.75
NUCKS1-202ENST00000464938 TTTY10Q9BZA0 68 aa-2.15□□□□□ -2.75
NUCKS1-202ENST00000464938 DNAH14Q0VDD8 3507 aa-2.15□□□□□ -2.75
NUCKS1-202ENST00000464938 RPL39P62891 51 aaKnown RBP-2.16□□□□□ -2.76
NUCKS1-202ENST00000464938 IQGAP2Q13576 1575 aa-2.17□□□□□ -2.76
NUCKS1-202ENST00000464938 LOC400499M0QZD8 3231 aa-2.18□□□□□ -2.76
NUCKS1-202ENST00000464938 ATP7AQ04656 1500 aa-2.18□□□□□ -2.76
NUCKS1-202ENST00000464938 TOP2AP11388 1531 aaKnown RBP-2.2□□□□□ -2.76
NUCKS1-202ENST00000464938 A0A096LNI7 61 aa-2.2□□□□□ -2.76
NUCKS1-202ENST00000464938 CFAP47Q6ZTR5 3102 aa-2.21□□□□□ -2.76
NUCKS1-202ENST00000464938 DEFB124Q8NES8 71 aa-2.22□□□□□ -2.76
NUCKS1-202ENST00000464938 UNC80Q8N2C7 3258 aa-2.23□□□□□ -2.77
NUCKS1-202ENST00000464938 HTN1P15515 57 aa-2.23□□□□□ -2.77
NUCKS1-202ENST00000464938 KRTAP19-2Q3LHN2 52 aa-2.23□□□□□ -2.77
NUCKS1-202ENST00000464938 RPL39LQ96EH5 51 aaKnown RBP-2.25□□□□□ -2.77
NUCKS1-202ENST00000464938 MROH2BQ7Z745 1585 aa-2.25□□□□□ -2.77
NUCKS1-202ENST00000464938 CD52P31358 61 aa-2.27□□□□□ -2.77
NUCKS1-202ENST00000464938 ASPMQ8IZT6 3477 aa-2.27□□□□□ -2.77
NUCKS1-202ENST00000464938 TOMM5Q8N4H5 51 aa-2.33□□□□□ -2.78
NUCKS1-202ENST00000464938 BRCA2P51587 3418 aa-2.36□□□□□ -2.79
NUCKS1-202ENST00000464938 VCANP13611 3396 aa-2.4□□□□□ -2.79
NUCKS1-202ENST00000464938 DEFB104AQ8WTQ1 72 aa-2.42□□□□□ -2.8
NUCKS1-202ENST00000464938 CENPFP49454 3210 aa-2.46□□□□□ -2.8
NUCKS1-202ENST00000464938 H3BUX3 64 aa-2.47□□□□□ -2.8
NUCKS1-202ENST00000464938 CDH23Q9H251 3354 aa-2.51□□□□□ -2.81
NUCKS1-202ENST00000464938 LINC01556Q5JQF7 62 aa-2.54□□□□□ -2.82
NUCKS1-202ENST00000464938 VPS13AQ96RL7 3174 aa-2.58□□□□□ -2.82
NUCKS1-202ENST00000464938 K7EIM0 57 aa-2.58□□□□□ -2.82
NUCKS1-202ENST00000464938 GCC2Q8IWJ2 1684 aa-2.69□□□□□ -2.84
NUCKS1-202ENST00000464938 ARHGAP5-AS1Q96IT6 56 aa-2.7□□□□□ -2.84
NUCKS1-202ENST00000464938 PRCDQ00LT1 54 aa-2.74□□□□□ -2.85
NUCKS1-202ENST00000464938 SNRPGP62308 76 aaKnown RBP-2.76□□□□□ -2.85
NUCKS1-202ENST00000464938 UTRNP46939 3433 aa-2.8□□□□□ -2.86
NUCKS1-202ENST00000464938 APELAP0DMC3 54 aa-2.82□□□□□ -2.86
NUCKS1-202ENST00000464938 A0A096LPF7 62 aa-2.83□□□□□ -2.86
NUCKS1-202ENST00000464938 TMEM167AQ8TBQ9 72 aa-2.86□□□□□ -2.87
NUCKS1-202ENST00000464938 RPL39P5Q59GN2 51 aa-3.01□□□□□ -2.89
NUCKS1-202ENST00000464938 HTN3P15516 51 aa-3.04□□□□□ -2.9
NUCKS1-202ENST00000464938 H3BSH0 61 aa-3.08□□□□□ -2.9
NUCKS1-202ENST00000464938 DEFB108AA8MXU0 73 aa-3.1□□□□□ -2.91
NUCKS1-202ENST00000464938 Q9Y3F1 56 aa-3.11□□□□□ -2.91
NUCKS1-202ENST00000464938 GOLGB1Q14789 3259 aaKnown RBP-3.14□□□□□ -2.91
NUCKS1-202ENST00000464938 COX14Q96I36 57 aa-3.36□□□□□ -2.95
NUCKS1-202ENST00000464938 DEFB108BQ8NET1 73 aa-3.46□□□□□ -2.96
NUCKS1-202ENST00000464938 STATHP02808 62 aa-3.91□□□□□ -3.04
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms