RNA–Protein interactions for RNA: ENST00000464368.1

TFRC-209, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-209ENST00000464368 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
TFRC-209ENST00000464368 SNURFQ9Y675 71 aa3.35□□□□□ -1.87
TFRC-209ENST00000464368 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
TFRC-209ENST00000464368 J3QR89 54 aa3.33□□□□□ -1.88
TFRC-209ENST00000464368 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
TFRC-209ENST00000464368 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
TFRC-209ENST00000464368 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
TFRC-209ENST00000464368 SMIM20Q8N5G0 67 aa3.31□□□□□ -1.88
TFRC-209ENST00000464368 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
TFRC-209ENST00000464368 SERP1Q9Y6X1 66 aa3.28□□□□□ -1.88
TFRC-209ENST00000464368 SEC61GP60059 68 aa3.27□□□□□ -1.89
TFRC-209ENST00000464368 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
TFRC-209ENST00000464368 A0A1B0GU33 70 aa3.26□□□□□ -1.89
TFRC-209ENST00000464368 COA5Q86WW8 74 aa3.26□□□□□ -1.89
TFRC-209ENST00000464368 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
TFRC-209ENST00000464368 TNP1P09430 55 aa3.22□□□□□ -1.89
TFRC-209ENST00000464368 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
TFRC-209ENST00000464368 A8MU10 97 aa3.2□□□□□ -1.9
TFRC-209ENST00000464368 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
TFRC-209ENST00000464368 ANAPC13Q9BS18 74 aa3.17□□□□□ -1.9
TFRC-209ENST00000464368 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
TFRC-209ENST00000464368 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
TFRC-209ENST00000464368 SERP2Q8N6R1 65 aa3.14□□□□□ -1.91
TFRC-209ENST00000464368 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
TFRC-209ENST00000464368 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
TFRC-209ENST00000464368 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
TFRC-209ENST00000464368 A0A1B0GU69 56 aa3.09□□□□□ -1.91
TFRC-209ENST00000464368 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
TFRC-209ENST00000464368 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
TFRC-209ENST00000464368 COX7CP15954 63 aa3.07□□□□□ -1.92
TFRC-209ENST00000464368 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
TFRC-209ENST00000464368 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
TFRC-209ENST00000464368 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
TFRC-209ENST00000464368 KRTAP5-8O75690 187 aa3□□□□□ -1.93
TFRC-209ENST00000464368 TMEM258P61165 79 aa3□□□□□ -1.93
TFRC-209ENST00000464368 H7BZZ5 65 aa2.99□□□□□ -1.93
TFRC-209ENST00000464368 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
TFRC-209ENST00000464368 MT3P25713 68 aa2.98□□□□□ -1.93
TFRC-209ENST00000464368 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
TFRC-209ENST00000464368 MT1AP04731 61 aa2.94□□□□□ -1.94
TFRC-209ENST00000464368 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
TFRC-209ENST00000464368 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
TFRC-209ENST00000464368 ATP5EP56381 51 aaPredicted RBP2.9□□□□□ -1.95
TFRC-209ENST00000464368 KRTAP25-1Q3LHN0 102 aa2.9□□□□□ -1.95
TFRC-209ENST00000464368 PRR15LQ9BU68 103 aa2.89□□□□□ -1.95
TFRC-209ENST00000464368 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TFRC-209ENST00000464368 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
TFRC-209ENST00000464368 UQCR11O14957 56 aa2.79□□□□□ -1.96
TFRC-209ENST00000464368 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
TFRC-209ENST00000464368 Q1T7F1 81 aa2.76□□□□□ -1.97
TFRC-209ENST00000464368 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
TFRC-209ENST00000464368 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
TFRC-209ENST00000464368 MIR22HGQ0VDD5 57 aa2.72□□□□□ -1.97
TFRC-209ENST00000464368 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
TFRC-209ENST00000464368 K7ERS5 55 aa2.7□□□□□ -1.98
TFRC-209ENST00000464368 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
TFRC-209ENST00000464368 V9GYY9 64 aa2.7□□□□□ -1.98
TFRC-209ENST00000464368 PSPHP1O15172 72 aa2.67□□□□□ -1.98
TFRC-209ENST00000464368 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
TFRC-209ENST00000464368 CDC42SE1Q9NRR8 79 aa2.59□□□□□ -1.99
TFRC-209ENST00000464368 A6NED7 52 aa2.57□□□□□ -2
TFRC-209ENST00000464368 PMAIP1Q13794 54 aa2.57□□□□□ -2
TFRC-209ENST00000464368 NDUFAF8A1L188 74 aa2.56□□□□□ -2
TFRC-209ENST00000464368 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
TFRC-209ENST00000464368 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
TFRC-209ENST00000464368 ROMO1P60602 79 aa2.48□□□□□ -2.01
TFRC-209ENST00000464368 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
TFRC-209ENST00000464368 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
TFRC-209ENST00000464368 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
TFRC-209ENST00000464368 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
TFRC-209ENST00000464368 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
TFRC-209ENST00000464368 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
TFRC-209ENST00000464368 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
TFRC-209ENST00000464368 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
TFRC-209ENST00000464368 INE1O15225 51 aa1.7□□□□□ -2.14
TFRC-209ENST00000464368 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
TFRC-209ENST00000464368 PRM1P04553 51 aa1.27□□□□□ -2.21
TFRC-209ENST00000464368 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms