RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 K7ERS5 55 aa7.85□□□□□ -1.15
CD58-204ENST00000464088 KRTAP19-7Q3SYF9 63 aa7.81□□□□□ -1.16
CD58-204ENST00000464088 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
CD58-204ENST00000464088 MT1EP04732 61 aa7.71□□□□□ -1.18
CD58-204ENST00000464088 CDC42SE1Q9NRR8 79 aa7.71□□□□□ -1.18
CD58-204ENST00000464088 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
CD58-204ENST00000464088 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
CD58-204ENST00000464088 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
CD58-204ENST00000464088 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
CD58-204ENST00000464088 HMCN1Q96RW7 5635 aa7.55□□□□□ -1.2
CD58-204ENST00000464088 KRTAP19-3Q7Z4W3 81 aa7.55□□□□□ -1.2
CD58-204ENST00000464088 AHNAK2Q8IVF2 5795 aa7.53□□□□□ -1.2
CD58-204ENST00000464088 KRTAP5-10Q6L8G5 202 aa7.46□□□□□ -1.22
CD58-204ENST00000464088 ROMO1P60602 79 aa7.45□□□□□ -1.22
CD58-204ENST00000464088 LCE4AQ5TA78 99 aa7.44□□□□□ -1.22
CD58-204ENST00000464088 MT1LQ93083 61 aa7.44□□□□□ -1.22
CD58-204ENST00000464088 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
CD58-204ENST00000464088 MT1GP13640 62 aa7.41□□□□□ -1.22
CD58-204ENST00000464088 MT4P47944 62 aa7.41□□□□□ -1.22
CD58-204ENST00000464088 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.22
CD58-204ENST00000464088 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
CD58-204ENST00000464088 MT1MQ8N339 61 aa7.3□□□□□ -1.24
CD58-204ENST00000464088 KRTAP5-7Q6L8G8 165 aa7.28□□□□□ -1.24
CD58-204ENST00000464088 BRK1Q8WUW1 75 aa7.27□□□□□ -1.25
CD58-204ENST00000464088 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.26
CD58-204ENST00000464088 KRTAP4-3Q9BYR4 195 aa7.12□□□□□ -1.27
CD58-204ENST00000464088 KRTAP5-3Q6L8H2 238 aa7.11□□□□□ -1.27
CD58-204ENST00000464088 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
CD58-204ENST00000464088 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
CD58-204ENST00000464088 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
CD58-204ENST00000464088 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
CD58-204ENST00000464088 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
CD58-204ENST00000464088 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
CD58-204ENST00000464088 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
CD58-204ENST00000464088 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
CD58-204ENST00000464088 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
CD58-204ENST00000464088 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
CD58-204ENST00000464088 PRO0628Q9UI54 55 aa6.72□□□□□ -1.33
CD58-204ENST00000464088 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
CD58-204ENST00000464088 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
CD58-204ENST00000464088 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
CD58-204ENST00000464088 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
CD58-204ENST00000464088 AHNAKQ09666 5890 aaKnown RBP6.48□□□□□ -1.37
CD58-204ENST00000464088 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
CD58-204ENST00000464088 SYNE1Q8NF91 8797 aaKnown RBP6.4□□□□□ -1.39
CD58-204ENST00000464088 MUC5ACP98088 5654 aa6.38□□□□□ -1.39
CD58-204ENST00000464088 MT1AP04731 61 aa6.33□□□□□ -1.4
CD58-204ENST00000464088 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
CD58-204ENST00000464088 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
CD58-204ENST00000464088 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
CD58-204ENST00000464088 KRTAP6-1Q3LI64 71 aa6.27□□□□□ -1.41
CD58-204ENST00000464088 KRTAP5-8O75690 187 aa6.21□□□□□ -1.42
CD58-204ENST00000464088 KRTAP5-2Q701N4 177 aa6.19□□□□□ -1.42
CD58-204ENST00000464088 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
CD58-204ENST00000464088 H3BS24 57 aa5.91□□□□□ -1.46
CD58-204ENST00000464088 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
CD58-204ENST00000464088 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
CD58-204ENST00000464088 MT3P25713 68 aa5.75□□□□□ -1.49
CD58-204ENST00000464088 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
CD58-204ENST00000464088 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
CD58-204ENST00000464088 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
CD58-204ENST00000464088 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
CD58-204ENST00000464088 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
CD58-204ENST00000464088 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
CD58-204ENST00000464088 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CD58-204ENST00000464088 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
CD58-204ENST00000464088 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
CD58-204ENST00000464088 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
CD58-204ENST00000464088 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
CD58-204ENST00000464088 PHGR1C9JFL3 82 aa4.36□□□□□ -1.71
CD58-204ENST00000464088 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
CD58-204ENST00000464088 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
CD58-204ENST00000464088 INE1O15225 51 aa3.88□□□□□ -1.79
CD58-204ENST00000464088 PRM1P04553 51 aa3.84□□□□□ -1.79
CD58-204ENST00000464088 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
CD58-204ENST00000464088 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
CD58-204ENST00000464088 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
CD58-204ENST00000464088 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 197.8 ms