RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
LMNB1-204ENST00000463908 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
LMNB1-204ENST00000463908 KRTAP25-1Q3LHN0 102 aa6.92□□□□□ -1.3
LMNB1-204ENST00000463908 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
LMNB1-204ENST00000463908 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
LMNB1-204ENST00000463908 MT1LQ93083 61 aa6.77□□□□□ -1.33
LMNB1-204ENST00000463908 ROMO1P60602 79 aa6.76□□□□□ -1.33
LMNB1-204ENST00000463908 MT1GP13640 62 aa6.75□□□□□ -1.33
LMNB1-204ENST00000463908 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
LMNB1-204ENST00000463908 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
LMNB1-204ENST00000463908 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
LMNB1-204ENST00000463908 MT1MQ8N339 61 aa6.65□□□□□ -1.34
LMNB1-204ENST00000463908 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
LMNB1-204ENST00000463908 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
LMNB1-204ENST00000463908 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
LMNB1-204ENST00000463908 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
LMNB1-204ENST00000463908 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
LMNB1-204ENST00000463908 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
LMNB1-204ENST00000463908 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
LMNB1-204ENST00000463908 HMCN1Q96RW7 5635 aa6.4□□□□□ -1.39
LMNB1-204ENST00000463908 AHNAK2Q8IVF2 5795 aa6.39□□□□□ -1.39
LMNB1-204ENST00000463908 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
LMNB1-204ENST00000463908 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
LMNB1-204ENST00000463908 MT4P47944 62 aa6.26□□□□□ -1.41
LMNB1-204ENST00000463908 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
LMNB1-204ENST00000463908 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
LMNB1-204ENST00000463908 KRTAP5-10Q6L8G5 202 aa6.21□□□□□ -1.42
LMNB1-204ENST00000463908 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
LMNB1-204ENST00000463908 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
LMNB1-204ENST00000463908 KRTAP5-5Q701N2 237 aaPredicted RBP6.08□□□□□ -1.44
LMNB1-204ENST00000463908 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
LMNB1-204ENST00000463908 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
LMNB1-204ENST00000463908 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
LMNB1-204ENST00000463908 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
LMNB1-204ENST00000463908 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
LMNB1-204ENST00000463908 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
LMNB1-204ENST00000463908 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
LMNB1-204ENST00000463908 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
LMNB1-204ENST00000463908 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
LMNB1-204ENST00000463908 MT1AP04731 61 aa5.75□□□□□ -1.49
LMNB1-204ENST00000463908 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
LMNB1-204ENST00000463908 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
LMNB1-204ENST00000463908 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
LMNB1-204ENST00000463908 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
LMNB1-204ENST00000463908 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
LMNB1-204ENST00000463908 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
LMNB1-204ENST00000463908 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
LMNB1-204ENST00000463908 AHNAKQ09666 5890 aaKnown RBP5.36□□□□□ -1.55
LMNB1-204ENST00000463908 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
LMNB1-204ENST00000463908 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
LMNB1-204ENST00000463908 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-204ENST00000463908 MT3P25713 68 aa5.23□□□□□ -1.57
LMNB1-204ENST00000463908 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
LMNB1-204ENST00000463908 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
LMNB1-204ENST00000463908 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
LMNB1-204ENST00000463908 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
LMNB1-204ENST00000463908 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
LMNB1-204ENST00000463908 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
LMNB1-204ENST00000463908 H3BS24 57 aa4.69□□□□□ -1.66
LMNB1-204ENST00000463908 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
LMNB1-204ENST00000463908 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
LMNB1-204ENST00000463908 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
LMNB1-204ENST00000463908 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
LMNB1-204ENST00000463908 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
LMNB1-204ENST00000463908 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
LMNB1-204ENST00000463908 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
LMNB1-204ENST00000463908 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
LMNB1-204ENST00000463908 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
LMNB1-204ENST00000463908 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
LMNB1-204ENST00000463908 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
LMNB1-204ENST00000463908 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
LMNB1-204ENST00000463908 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
LMNB1-204ENST00000463908 PRM1P04553 51 aa3.5□□□□□ -1.85
LMNB1-204ENST00000463908 INE1O15225 51 aa3.49□□□□□ -1.85
LMNB1-204ENST00000463908 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
LMNB1-204ENST00000463908 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
LMNB1-204ENST00000463908 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
LMNB1-204ENST00000463908 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms