RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CHKB-CPT1BH3BT56 60 aa1.59□□□□□ -2.15
SCFD1-204ENST00000463622 MT1BP07438 61 aa1.58□□□□□ -2.16
SCFD1-204ENST00000463622 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
SCFD1-204ENST00000463622 ATP5EP56381 51 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-204ENST00000463622 H0YAA0 97 aa1.57□□□□□ -2.16
SCFD1-204ENST00000463622 SERP1Q9Y6X1 66 aa1.56□□□□□ -2.16
SCFD1-204ENST00000463622 SPRR2EP22531 72 aa1.56□□□□□ -2.16
SCFD1-204ENST00000463622 SPRR2BP35325 72 aa1.56□□□□□ -2.16
SCFD1-204ENST00000463622 SPRR2AP35326 72 aa1.56□□□□□ -2.16
SCFD1-204ENST00000463622 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
SCFD1-204ENST00000463622 SPRR2GQ9BYE4 73 aa1.56□□□□□ -2.16
SCFD1-204ENST00000463622 SPATA8Q6RVD6 105 aa1.54□□□□□ -2.16
SCFD1-204ENST00000463622 SPTSSBQ8NFR3 76 aa1.54□□□□□ -2.16
SCFD1-204ENST00000463622 LINC01558Q9Y6Z2 57 aa1.54□□□□□ -2.16
SCFD1-204ENST00000463622 M0QZ58 72 aa1.53□□□□□ -2.16
SCFD1-204ENST00000463622 Q5VV11 94 aa1.53□□□□□ -2.16
SCFD1-204ENST00000463622 SPRR2FQ96RM1 72 aa1.53□□□□□ -2.16
SCFD1-204ENST00000463622 A0A1B0GU69 56 aa1.52□□□□□ -2.17
SCFD1-204ENST00000463622 PSPHP1O15172 72 aa1.52□□□□□ -2.17
SCFD1-204ENST00000463622 PRR15LQ9BU68 103 aa1.52□□□□□ -2.17
SCFD1-204ENST00000463622 SMIM26A0A096LP01 95 aa1.51□□□□□ -2.17
SCFD1-204ENST00000463622 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
SCFD1-204ENST00000463622 LINC01554Q52M75 96 aa1.51□□□□□ -2.17
SCFD1-204ENST00000463622 R4GN34 69 aa1.51□□□□□ -2.17
SCFD1-204ENST00000463622 SPRR2DP22532 72 aa1.5□□□□□ -2.17
SCFD1-204ENST00000463622 Q1T7F1 81 aa1.5□□□□□ -2.17
SCFD1-204ENST00000463622 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
SCFD1-204ENST00000463622 A0A0D9SG42 100 aa1.5□□□□□ -2.17
SCFD1-204ENST00000463622 A0A1B0GU33 70 aa1.5□□□□□ -2.17
SCFD1-204ENST00000463622 MT1XP80297 61 aa1.48□□□□□ -2.17
SCFD1-204ENST00000463622 KRTAP12-1P59990 96 aa1.48□□□□□ -2.17
SCFD1-204ENST00000463622 SEC61GP60059 68 aa1.48□□□□□ -2.17
SCFD1-204ENST00000463622 KRTAP8-1Q8IUC2 63 aa1.47□□□□□ -2.17
SCFD1-204ENST00000463622 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
SCFD1-204ENST00000463622 V9GYY9 64 aa1.45□□□□□ -2.18
SCFD1-204ENST00000463622 SPINT4Q6UDR6 99 aa1.44□□□□□ -2.18
SCFD1-204ENST00000463622 UQCR11O14957 56 aa1.44□□□□□ -2.18
SCFD1-204ENST00000463622 MIR22HGQ0VDD5 57 aa1.44□□□□□ -2.18
SCFD1-204ENST00000463622 CAMK2N1Q7Z7J9 78 aa1.44□□□□□ -2.18
SCFD1-204ENST00000463622 A6NED7 52 aa1.43□□□□□ -2.18
SCFD1-204ENST00000463622 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
SCFD1-204ENST00000463622 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
SCFD1-204ENST00000463622 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
SCFD1-204ENST00000463622 PRO2289Q9P1D8 64 aa1.41□□□□□ -2.18
SCFD1-204ENST00000463622 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.18
SCFD1-204ENST00000463622 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.18
SCFD1-204ENST00000463622 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
SCFD1-204ENST00000463622 CDC42SE1Q9NRR8 79 aa1.4□□□□□ -2.19
SCFD1-204ENST00000463622 BRK1Q8WUW1 75 aa1.37□□□□□ -2.19
SCFD1-204ENST00000463622 KRTAP19-7Q3SYF9 63 aa1.33□□□□□ -2.2
SCFD1-204ENST00000463622 MT4P47944 62 aa1.32□□□□□ -2.2
SCFD1-204ENST00000463622 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
SCFD1-204ENST00000463622 K7ERS5 55 aa1.32□□□□□ -2.2
SCFD1-204ENST00000463622 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
SCFD1-204ENST00000463622 ROMO1P60602 79 aa1.32□□□□□ -2.2
SCFD1-204ENST00000463622 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
SCFD1-204ENST00000463622 TNP1P09430 55 aa1.31□□□□□ -2.2
SCFD1-204ENST00000463622 KRTAP19-3Q7Z4W3 81 aa1.3□□□□□ -2.2
SCFD1-204ENST00000463622 MT1EP04732 61 aa1.3□□□□□ -2.2
SCFD1-204ENST00000463622 KRTAP25-1Q3LHN0 102 aa1.29□□□□□ -2.2
SCFD1-204ENST00000463622 PRO0628Q9UI54 55 aa1.28□□□□□ -2.2
SCFD1-204ENST00000463622 PMAIP1Q13794 54 aa1.27□□□□□ -2.21
SCFD1-204ENST00000463622 MT1GP13640 62 aa1.27□□□□□ -2.21
SCFD1-204ENST00000463622 MT1LQ93083 61 aa1.26□□□□□ -2.21
SCFD1-204ENST00000463622 KRTAP20-2Q3LI61 65 aa1.23□□□□□ -2.21
SCFD1-204ENST00000463622 MT1MQ8N339 61 aa1.23□□□□□ -2.21
SCFD1-204ENST00000463622 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
SCFD1-204ENST00000463622 KTN1-AS1Q86SY8 53 aa1.2□□□□□ -2.22
SCFD1-204ENST00000463622 SYNE1Q8NF91 8797 aaKnown RBP1.14□□□□□ -2.23
SCFD1-204ENST00000463622 LUZP6Q538Z0 58 aa1.09□□□□□ -2.23
SCFD1-204ENST00000463622 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
SCFD1-204ENST00000463622 MT1AP04731 61 aa1.05□□□□□ -2.24
SCFD1-204ENST00000463622 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
SCFD1-204ENST00000463622 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
SCFD1-204ENST00000463622 PRM1P04553 51 aa0.71□□□□□ -2.3
SCFD1-204ENST00000463622 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
SCFD1-204ENST00000463622 INE1O15225 51 aa0.7□□□□□ -2.3
SCFD1-204ENST00000463622 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms