RNA–Protein interactions for RNA: ENST00000463563.6

U2SURP-203, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 2

Gene U2SURP, Length 4,364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-203ENST00000463563 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
U2SURP-203ENST00000463563 MXRA5Q9NR99 2828 aa0.79□□□□□ -2.28
U2SURP-203ENST00000463563 EPPK1P58107 5090 aaKnown RBP0.79□□□□□ -2.28
U2SURP-203ENST00000463563 APOBP04114 4563 aaKnown RBP0.79□□□□□ -2.28
U2SURP-203ENST00000463563 FAT4Q6V0I7 4981 aa0.79□□□□□ -2.28
U2SURP-203ENST00000463563 NBEAL1Q6ZS30 2694 aa0.78□□□□□ -2.28
U2SURP-203ENST00000463563 C9orf92A6NGG3 77 aa0.76□□□□□ -2.29
U2SURP-203ENST00000463563 SMR3AQ99954 134 aa0.76□□□□□ -2.29
U2SURP-203ENST00000463563 MUC2Q02817 5179 aa0.75□□□□□ -2.29
U2SURP-203ENST00000463563 TEX15Q9BXT5 2789 aa0.75□□□□□ -2.29
U2SURP-203ENST00000463563 HMCN2Q8NDA2 5059 aa0.75□□□□□ -2.29
U2SURP-203ENST00000463563 LCE1CQ5T751 118 aa0.74□□□□□ -2.29
U2SURP-203ENST00000463563 LCE1BQ5T7P3 118 aa0.74□□□□□ -2.29
U2SURP-203ENST00000463563 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
U2SURP-203ENST00000463563 ABCA13Q86UQ4 5058 aa0.74□□□□□ -2.29
U2SURP-203ENST00000463563 RHPN1-AS1Q9BWJ2 59 aa0.74□□□□□ -2.29
U2SURP-203ENST00000463563 LRP2P98164 4655 aa0.74□□□□□ -2.29
U2SURP-203ENST00000463563 DEFB136Q30KP8 78 aa0.73□□□□□ -2.29
U2SURP-203ENST00000463563 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
U2SURP-203ENST00000463563 DEFB1P60022 68 aa0.73□□□□□ -2.29
U2SURP-203ENST00000463563 PRM1P04553 51 aa0.72□□□□□ -2.29
U2SURP-203ENST00000463563 COX14Q96I36 57 aa0.71□□□□□ -2.3
U2SURP-203ENST00000463563 H3BUX3 64 aa0.71□□□□□ -2.3
U2SURP-203ENST00000463563 SSPOA2VEC9 5147 aa0.7□□□□□ -2.3
U2SURP-203ENST00000463563 STATHP02808 62 aa0.7□□□□□ -2.3
U2SURP-203ENST00000463563 RNF213Q63HN8 5207 aa0.7□□□□□ -2.3
U2SURP-203ENST00000463563 TGP01266 2768 aa0.69□□□□□ -2.3
U2SURP-203ENST00000463563 UBR4Q5T4S7 5183 aa0.69□□□□□ -2.3
U2SURP-203ENST00000463563 CD52P31358 61 aa0.68□□□□□ -2.3
U2SURP-203ENST00000463563 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
U2SURP-203ENST00000463563 TENM1Q9UKZ4 2725 aa0.66□□□□□ -2.3
U2SURP-203ENST00000463563 CENPEQ02224 2701 aa0.66□□□□□ -2.3
U2SURP-203ENST00000463563 ITPR2Q14571 2701 aa0.66□□□□□ -2.3
U2SURP-203ENST00000463563 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
U2SURP-203ENST00000463563 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.3
U2SURP-203ENST00000463563 DEFB124Q8NES8 71 aa0.65□□□□□ -2.31
U2SURP-203ENST00000463563 DEFB108BQ8NET1 73 aa0.65□□□□□ -2.31
U2SURP-203ENST00000463563 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
U2SURP-203ENST00000463563 A0A096LPF7 62 aa0.64□□□□□ -2.31
U2SURP-203ENST00000463563 HIVEP1P15822 2718 aa0.63□□□□□ -2.31
U2SURP-203ENST00000463563 DEFB133Q30KQ1 61 aa0.61□□□□□ -2.31
U2SURP-203ENST00000463563 KRTAP19-2Q3LHN2 52 aa0.59□□□□□ -2.32
U2SURP-203ENST00000463563 USH2AO75445 5202 aa0.58□□□□□ -2.32
U2SURP-203ENST00000463563 SPRR2DP22532 72 aa0.56□□□□□ -2.32
U2SURP-203ENST00000463563 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
U2SURP-203ENST00000463563 MT1HL1P0DM35 61 aa0.55□□□□□ -2.32
U2SURP-203ENST00000463563 KRTAP19-6Q3LI70 58 aa0.55□□□□□ -2.32
U2SURP-203ENST00000463563 HTN3P15516 51 aa0.53□□□□□ -2.32
U2SURP-203ENST00000463563 LINC01556Q5JQF7 62 aa0.53□□□□□ -2.32
U2SURP-203ENST00000463563 SPRR2EP22531 72 aa0.51□□□□□ -2.33
U2SURP-203ENST00000463563 SPRR2BP35325 72 aa0.51□□□□□ -2.33
U2SURP-203ENST00000463563 SPRR2AP35326 72 aa0.51□□□□□ -2.33
U2SURP-203ENST00000463563 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
U2SURP-203ENST00000463563 RPS29P62273 56 aaKnown RBP0.5□□□□□ -2.33
U2SURP-203ENST00000463563 SMR3BP02814 79 aaPredicted RBP0.5□□□□□ -2.33
U2SURP-203ENST00000463563 KRTAP21-2Q3LI59 83 aa0.5□□□□□ -2.33
U2SURP-203ENST00000463563 MT1AP04731 61 aa0.47□□□□□ -2.33
U2SURP-203ENST00000463563 MT1HP80294 61 aa0.46□□□□□ -2.34
U2SURP-203ENST00000463563 MUC12Q9UKN1 5478 aa0.45□□□□□ -2.34
U2SURP-203ENST00000463563 MT4P47944 62 aa0.45□□□□□ -2.34
U2SURP-203ENST00000463563 KRTAP19-8Q3LI54 63 aa0.45□□□□□ -2.34
U2SURP-203ENST00000463563 KRTAP4-1Q9BYQ7 146 aa0.45□□□□□ -2.34
U2SURP-203ENST00000463563 DEFB4AO15263 64 aa0.44□□□□□ -2.34
U2SURP-203ENST00000463563 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
U2SURP-203ENST00000463563 SPRR2FQ96RM1 72 aa0.43□□□□□ -2.34
U2SURP-203ENST00000463563 SPRR2GQ9BYE4 73 aa0.42□□□□□ -2.34
U2SURP-203ENST00000463563 MUC16Q8WXI7 14507 aa0.39□□□□□ -2.35
U2SURP-203ENST00000463563 MT2AP02795 61 aa0.38□□□□□ -2.35
U2SURP-203ENST00000463563 MT1BP07438 61 aa0.36□□□□□ -2.35
U2SURP-203ENST00000463563 MT1FP04733 61 aa0.36□□□□□ -2.35
U2SURP-203ENST00000463563 KRTAP20-2Q3LI61 65 aa0.33□□□□□ -2.36
U2SURP-203ENST00000463563 MT1EP04732 61 aa0.31□□□□□ -2.36
U2SURP-203ENST00000463563 MT1XP80297 61 aa0.31□□□□□ -2.36
U2SURP-203ENST00000463563 MT1MQ8N339 61 aa0.31□□□□□ -2.36
U2SURP-203ENST00000463563 MT1LQ93083 61 aa0.3□□□□□ -2.36
U2SURP-203ENST00000463563 KRTAP19-7Q3SYF9 63 aa0.29□□□□□ -2.36
U2SURP-203ENST00000463563 MT1GP13640 62 aa0.27□□□□□ -2.37
U2SURP-203ENST00000463563 KRTAP6-1Q3LI64 71 aa0.27□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms