RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
CMSS1-202ENST00000463526 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
CMSS1-202ENST00000463526 SERP2Q8N6R1 65 aa5.27□□□□□ -1.57
CMSS1-202ENST00000463526 K7ERU9 68 aa5.25□□□□□ -1.57
CMSS1-202ENST00000463526 A8MU10 97 aa5.19□□□□□ -1.58
CMSS1-202ENST00000463526 TNP1P09430 55 aa5.19□□□□□ -1.58
CMSS1-202ENST00000463526 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
CMSS1-202ENST00000463526 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
CMSS1-202ENST00000463526 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
CMSS1-202ENST00000463526 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
CMSS1-202ENST00000463526 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
CMSS1-202ENST00000463526 A0A1B0GU69 56 aa5.11□□□□□ -1.59
CMSS1-202ENST00000463526 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
CMSS1-202ENST00000463526 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
CMSS1-202ENST00000463526 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
CMSS1-202ENST00000463526 H7BZZ5 65 aa5.01□□□□□ -1.61
CMSS1-202ENST00000463526 COX7CP15954 63 aa5.01□□□□□ -1.61
CMSS1-202ENST00000463526 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
CMSS1-202ENST00000463526 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
CMSS1-202ENST00000463526 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
CMSS1-202ENST00000463526 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
CMSS1-202ENST00000463526 ANAPC13Q9BS18 74 aa4.74□□□□□ -1.65
CMSS1-202ENST00000463526 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
CMSS1-202ENST00000463526 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
CMSS1-202ENST00000463526 CCDC179H3BU77 68 aa4.68□□□□□ -1.66
CMSS1-202ENST00000463526 UQCR11O14957 56 aa4.67□□□□□ -1.66
CMSS1-202ENST00000463526 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
CMSS1-202ENST00000463526 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
CMSS1-202ENST00000463526 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
CMSS1-202ENST00000463526 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
CMSS1-202ENST00000463526 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
CMSS1-202ENST00000463526 MT1AP04731 61 aa4.6□□□□□ -1.67
CMSS1-202ENST00000463526 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
CMSS1-202ENST00000463526 ATP5EP56381 51 aaPredicted RBP4.59□□□□□ -1.67
CMSS1-202ENST00000463526 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
CMSS1-202ENST00000463526 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
CMSS1-202ENST00000463526 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
CMSS1-202ENST00000463526 K7ERS5 55 aa4.53□□□□□ -1.68
CMSS1-202ENST00000463526 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
CMSS1-202ENST00000463526 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
CMSS1-202ENST00000463526 TMEM258P61165 79 aa4.45□□□□□ -1.7
CMSS1-202ENST00000463526 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
CMSS1-202ENST00000463526 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
CMSS1-202ENST00000463526 PSPHP1O15172 72 aa4.33□□□□□ -1.72
CMSS1-202ENST00000463526 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
CMSS1-202ENST00000463526 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
CMSS1-202ENST00000463526 MT3P25713 68 aa4.23□□□□□ -1.73
CMSS1-202ENST00000463526 Q1T7F1 81 aa4.23□□□□□ -1.73
CMSS1-202ENST00000463526 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
CMSS1-202ENST00000463526 V9GYY9 64 aa4.21□□□□□ -1.74
CMSS1-202ENST00000463526 PCP4P48539 62 aa4.17□□□□□ -1.74
CMSS1-202ENST00000463526 ROMO1P60602 79 aa4.16□□□□□ -1.74
CMSS1-202ENST00000463526 A6NED7 52 aa4.14□□□□□ -1.75
CMSS1-202ENST00000463526 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
CMSS1-202ENST00000463526 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
CMSS1-202ENST00000463526 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
CMSS1-202ENST00000463526 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
CMSS1-202ENST00000463526 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
CMSS1-202ENST00000463526 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
CMSS1-202ENST00000463526 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
CMSS1-202ENST00000463526 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
CMSS1-202ENST00000463526 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
CMSS1-202ENST00000463526 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
CMSS1-202ENST00000463526 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
CMSS1-202ENST00000463526 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
CMSS1-202ENST00000463526 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
CMSS1-202ENST00000463526 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
CMSS1-202ENST00000463526 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
CMSS1-202ENST00000463526 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
CMSS1-202ENST00000463526 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
CMSS1-202ENST00000463526 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
CMSS1-202ENST00000463526 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
CMSS1-202ENST00000463526 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
CMSS1-202ENST00000463526 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
CMSS1-202ENST00000463526 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
CMSS1-202ENST00000463526 PRM1P04553 51 aa2.13□□□□□ -2.07
CMSS1-202ENST00000463526 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
CMSS1-202ENST00000463526 INE1O15225 51 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms