RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SPRR2AP35326 72 aa4.83□□□□□ -1.64
RTCB-202ENST00000463455 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
RTCB-202ENST00000463455 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
RTCB-202ENST00000463455 A8MU10 97 aa4.8□□□□□ -1.64
RTCB-202ENST00000463455 A6NED7 52 aa4.78□□□□□ -1.64
RTCB-202ENST00000463455 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
RTCB-202ENST00000463455 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
RTCB-202ENST00000463455 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
RTCB-202ENST00000463455 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
RTCB-202ENST00000463455 SPRR2DP22532 72 aa4.67□□□□□ -1.66
RTCB-202ENST00000463455 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
RTCB-202ENST00000463455 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
RTCB-202ENST00000463455 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
RTCB-202ENST00000463455 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
RTCB-202ENST00000463455 A0A1B0GU69 56 aa4.57□□□□□ -1.68
RTCB-202ENST00000463455 UQCR11O14957 56 aa4.53□□□□□ -1.68
RTCB-202ENST00000463455 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
RTCB-202ENST00000463455 A0A1B0GU33 70 aa4.5□□□□□ -1.69
RTCB-202ENST00000463455 A0A0D9SG42 100 aa4.48□□□□□ -1.69
RTCB-202ENST00000463455 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
RTCB-202ENST00000463455 MT1EP04732 61 aa4.44□□□□□ -1.7
RTCB-202ENST00000463455 SPINT4Q6UDR6 99 aa4.44□□□□□ -1.7
RTCB-202ENST00000463455 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
RTCB-202ENST00000463455 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
RTCB-202ENST00000463455 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
RTCB-202ENST00000463455 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
RTCB-202ENST00000463455 MT1GP13640 62 aa4.33□□□□□ -1.72
RTCB-202ENST00000463455 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
RTCB-202ENST00000463455 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
RTCB-202ENST00000463455 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
RTCB-202ENST00000463455 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
RTCB-202ENST00000463455 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
RTCB-202ENST00000463455 TNP1P09430 55 aa4.27□□□□□ -1.73
RTCB-202ENST00000463455 MT1LQ93083 61 aa4.24□□□□□ -1.73
RTCB-202ENST00000463455 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
RTCB-202ENST00000463455 MT1MQ8N339 61 aa4.22□□□□□ -1.73
RTCB-202ENST00000463455 C10orf95Q9H7T3 257 aa4.22□□□□□ -1.73
RTCB-202ENST00000463455 K7ERS5 55 aa4.21□□□□□ -1.74
RTCB-202ENST00000463455 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
RTCB-202ENST00000463455 ROMO1P60602 79 aa4.17□□□□□ -1.74
RTCB-202ENST00000463455 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
RTCB-202ENST00000463455 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
RTCB-202ENST00000463455 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
RTCB-202ENST00000463455 MT4P47944 62 aa4.06□□□□□ -1.76
RTCB-202ENST00000463455 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
RTCB-202ENST00000463455 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
RTCB-202ENST00000463455 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
RTCB-202ENST00000463455 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
RTCB-202ENST00000463455 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
RTCB-202ENST00000463455 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
RTCB-202ENST00000463455 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
RTCB-202ENST00000463455 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
RTCB-202ENST00000463455 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
RTCB-202ENST00000463455 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
RTCB-202ENST00000463455 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
RTCB-202ENST00000463455 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
RTCB-202ENST00000463455 MT1AP04731 61 aa3.62□□□□□ -1.83
RTCB-202ENST00000463455 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
RTCB-202ENST00000463455 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
RTCB-202ENST00000463455 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
RTCB-202ENST00000463455 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
RTCB-202ENST00000463455 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
RTCB-202ENST00000463455 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
RTCB-202ENST00000463455 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
RTCB-202ENST00000463455 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
RTCB-202ENST00000463455 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
RTCB-202ENST00000463455 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
RTCB-202ENST00000463455 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
RTCB-202ENST00000463455 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
RTCB-202ENST00000463455 INE1O15225 51 aa3.2□□□□□ -1.9
RTCB-202ENST00000463455 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
RTCB-202ENST00000463455 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
RTCB-202ENST00000463455 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
RTCB-202ENST00000463455 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
RTCB-202ENST00000463455 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
RTCB-202ENST00000463455 PRM1P04553 51 aa2.19□□□□□ -2.06
RTCB-202ENST00000463455 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
RTCB-202ENST00000463455 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 95.9 ms