RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MT1GP13640 62 aa5.69□□□□□ -1.5
ERCC3-206ENST00000462306 K7ERS5 55 aa5.67□□□□□ -1.5
ERCC3-206ENST00000462306 MT1LQ93083 61 aa5.66□□□□□ -1.5
ERCC3-206ENST00000462306 A6NED7 52 aa5.63□□□□□ -1.51
ERCC3-206ENST00000462306 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
ERCC3-206ENST00000462306 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
ERCC3-206ENST00000462306 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
ERCC3-206ENST00000462306 MT1MQ8N339 61 aa5.6□□□□□ -1.51
ERCC3-206ENST00000462306 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
ERCC3-206ENST00000462306 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
ERCC3-206ENST00000462306 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
ERCC3-206ENST00000462306 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
ERCC3-206ENST00000462306 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
ERCC3-206ENST00000462306 ROMO1P60602 79 aa5.35□□□□□ -1.55
ERCC3-206ENST00000462306 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
ERCC3-206ENST00000462306 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
ERCC3-206ENST00000462306 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
ERCC3-206ENST00000462306 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
ERCC3-206ENST00000462306 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
ERCC3-206ENST00000462306 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
ERCC3-206ENST00000462306 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
ERCC3-206ENST00000462306 MT4P47944 62 aa5.2□□□□□ -1.58
ERCC3-206ENST00000462306 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
ERCC3-206ENST00000462306 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
ERCC3-206ENST00000462306 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
ERCC3-206ENST00000462306 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
ERCC3-206ENST00000462306 H3BS24 57 aa5.1□□□□□ -1.59
ERCC3-206ENST00000462306 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
ERCC3-206ENST00000462306 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
ERCC3-206ENST00000462306 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
ERCC3-206ENST00000462306 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
ERCC3-206ENST00000462306 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
ERCC3-206ENST00000462306 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
ERCC3-206ENST00000462306 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
ERCC3-206ENST00000462306 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.63
ERCC3-206ENST00000462306 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
ERCC3-206ENST00000462306 MT1AP04731 61 aa4.82□□□□□ -1.64
ERCC3-206ENST00000462306 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
ERCC3-206ENST00000462306 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
ERCC3-206ENST00000462306 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
ERCC3-206ENST00000462306 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
ERCC3-206ENST00000462306 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
ERCC3-206ENST00000462306 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
ERCC3-206ENST00000462306 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
ERCC3-206ENST00000462306 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
ERCC3-206ENST00000462306 PRAC1Q96KF2 57 aa4.53□□□□□ -1.68
ERCC3-206ENST00000462306 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
ERCC3-206ENST00000462306 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
ERCC3-206ENST00000462306 MT3P25713 68 aa4.39□□□□□ -1.71
ERCC3-206ENST00000462306 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
ERCC3-206ENST00000462306 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
ERCC3-206ENST00000462306 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
ERCC3-206ENST00000462306 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
ERCC3-206ENST00000462306 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
ERCC3-206ENST00000462306 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
ERCC3-206ENST00000462306 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
ERCC3-206ENST00000462306 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
ERCC3-206ENST00000462306 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
ERCC3-206ENST00000462306 LCE1EQ5T753 118 aa4□□□□□ -1.77
ERCC3-206ENST00000462306 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
ERCC3-206ENST00000462306 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
ERCC3-206ENST00000462306 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
ERCC3-206ENST00000462306 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
ERCC3-206ENST00000462306 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
ERCC3-206ENST00000462306 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
ERCC3-206ENST00000462306 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
ERCC3-206ENST00000462306 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
ERCC3-206ENST00000462306 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
ERCC3-206ENST00000462306 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
ERCC3-206ENST00000462306 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
ERCC3-206ENST00000462306 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
ERCC3-206ENST00000462306 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
ERCC3-206ENST00000462306 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
ERCC3-206ENST00000462306 PRM1P04553 51 aa2.75□□□□□ -1.97
ERCC3-206ENST00000462306 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
ERCC3-206ENST00000462306 INE1O15225 51 aa2.54□□□□□ -2
ERCC3-206ENST00000462306 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
ERCC3-206ENST00000462306 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms