RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
BRCA1-207ENST00000461798 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
BRCA1-207ENST00000461798 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
BRCA1-207ENST00000461798 H7BZZ5 65 aa3.36□□□□□ -1.87
BRCA1-207ENST00000461798 SPINT4Q6UDR6 99 aa3.36□□□□□ -1.87
BRCA1-207ENST00000461798 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
BRCA1-207ENST00000461798 MT1GP13640 62 aa3.34□□□□□ -1.87
BRCA1-207ENST00000461798 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
BRCA1-207ENST00000461798 CYSTM1Q9H1C7 97 aa3.33□□□□□ -1.88
BRCA1-207ENST00000461798 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
BRCA1-207ENST00000461798 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
BRCA1-207ENST00000461798 A0A1B0GU69 56 aa3.28□□□□□ -1.88
BRCA1-207ENST00000461798 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
BRCA1-207ENST00000461798 MT1MQ8N339 61 aa3.26□□□□□ -1.89
BRCA1-207ENST00000461798 MT1LQ93083 61 aa3.26□□□□□ -1.89
BRCA1-207ENST00000461798 A8MU10 97 aa3.24□□□□□ -1.89
BRCA1-207ENST00000461798 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
BRCA1-207ENST00000461798 TNP1P09430 55 aa3.22□□□□□ -1.89
BRCA1-207ENST00000461798 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
BRCA1-207ENST00000461798 ANAPC13Q9BS18 74 aa3.2□□□□□ -1.9
BRCA1-207ENST00000461798 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
BRCA1-207ENST00000461798 MT3P25713 68 aa3.16□□□□□ -1.9
BRCA1-207ENST00000461798 CCDC179H3BU77 68 aa3.15□□□□□ -1.91
BRCA1-207ENST00000461798 MT4P47944 62 aa3.15□□□□□ -1.91
BRCA1-207ENST00000461798 ATP5EP56381 51 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-207ENST00000461798 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
BRCA1-207ENST00000461798 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
BRCA1-207ENST00000461798 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
BRCA1-207ENST00000461798 UQCR11O14957 56 aa3.07□□□□□ -1.92
BRCA1-207ENST00000461798 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
BRCA1-207ENST00000461798 TMEM258P61165 79 aa3.04□□□□□ -1.92
BRCA1-207ENST00000461798 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
BRCA1-207ENST00000461798 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
BRCA1-207ENST00000461798 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-207ENST00000461798 MIR22HGQ0VDD5 57 aa2.99□□□□□ -1.93
BRCA1-207ENST00000461798 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
BRCA1-207ENST00000461798 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
BRCA1-207ENST00000461798 K7ERS5 55 aa2.94□□□□□ -1.94
BRCA1-207ENST00000461798 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
BRCA1-207ENST00000461798 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
BRCA1-207ENST00000461798 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
BRCA1-207ENST00000461798 V9GYY9 64 aa2.91□□□□□ -1.94
BRCA1-207ENST00000461798 Q1T7F1 81 aa2.89□□□□□ -1.95
BRCA1-207ENST00000461798 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
BRCA1-207ENST00000461798 PSPHP1O15172 72 aa2.87□□□□□ -1.95
BRCA1-207ENST00000461798 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
BRCA1-207ENST00000461798 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
BRCA1-207ENST00000461798 MT1AP04731 61 aa2.78□□□□□ -1.96
BRCA1-207ENST00000461798 A6NED7 52 aa2.77□□□□□ -1.97
BRCA1-207ENST00000461798 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
BRCA1-207ENST00000461798 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
BRCA1-207ENST00000461798 ROMO1P60602 79 aa2.74□□□□□ -1.97
BRCA1-207ENST00000461798 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
BRCA1-207ENST00000461798 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
BRCA1-207ENST00000461798 LCE1CQ5T751 118 aa2.57□□□□□ -2
BRCA1-207ENST00000461798 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
BRCA1-207ENST00000461798 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
BRCA1-207ENST00000461798 MUC5ACP98088 5654 aa2.54□□□□□ -2
BRCA1-207ENST00000461798 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2.01
BRCA1-207ENST00000461798 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
BRCA1-207ENST00000461798 PCP4P48539 62 aa2.5□□□□□ -2.01
BRCA1-207ENST00000461798 SVIPQ8NHG7 77 aa2.36□□□□□ -2.03
BRCA1-207ENST00000461798 BRK1Q8WUW1 75 aa2.27□□□□□ -2.05
BRCA1-207ENST00000461798 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
BRCA1-207ENST00000461798 A0A0A0MQY5 61 aa2.18□□□□□ -2.06
BRCA1-207ENST00000461798 PMAIP1Q13794 54 aa2.14□□□□□ -2.07
BRCA1-207ENST00000461798 PRAC1Q96KF2 57 aa2.07□□□□□ -2.08
BRCA1-207ENST00000461798 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
BRCA1-207ENST00000461798 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
BRCA1-207ENST00000461798 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
BRCA1-207ENST00000461798 NDUFAF8A1L188 74 aa1.85□□□□□ -2.11
BRCA1-207ENST00000461798 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
BRCA1-207ENST00000461798 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
BRCA1-207ENST00000461798 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
BRCA1-207ENST00000461798 PRM1P04553 51 aa1.38□□□□□ -2.19
BRCA1-207ENST00000461798 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
BRCA1-207ENST00000461798 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
BRCA1-207ENST00000461798 INE1O15225 51 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms