RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
PABPC4-208ENST00000461578 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
PABPC4-208ENST00000461578 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
PABPC4-208ENST00000461578 SMIM20Q8N5G0 67 aa4.37□□□□□ -1.71
PABPC4-208ENST00000461578 COA5Q86WW8 74 aa4.35□□□□□ -1.71
PABPC4-208ENST00000461578 J3QR89 54 aa4.32□□□□□ -1.72
PABPC4-208ENST00000461578 A8MU10 97 aa4.31□□□□□ -1.72
PABPC4-208ENST00000461578 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
PABPC4-208ENST00000461578 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
PABPC4-208ENST00000461578 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
PABPC4-208ENST00000461578 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
PABPC4-208ENST00000461578 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
PABPC4-208ENST00000461578 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
PABPC4-208ENST00000461578 A0A1B0GV90 55 aa4.23□□□□□ -1.73
PABPC4-208ENST00000461578 A0A1B0GU69 56 aa4.14□□□□□ -1.75
PABPC4-208ENST00000461578 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
PABPC4-208ENST00000461578 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
PABPC4-208ENST00000461578 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
PABPC4-208ENST00000461578 MT1AP04731 61 aa4.1□□□□□ -1.75
PABPC4-208ENST00000461578 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
PABPC4-208ENST00000461578 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
PABPC4-208ENST00000461578 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
PABPC4-208ENST00000461578 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
PABPC4-208ENST00000461578 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
PABPC4-208ENST00000461578 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
PABPC4-208ENST00000461578 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
PABPC4-208ENST00000461578 K7ERU9 68 aa3.92□□□□□ -1.78
PABPC4-208ENST00000461578 H7BZZ5 65 aa3.9□□□□□ -1.79
PABPC4-208ENST00000461578 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
PABPC4-208ENST00000461578 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
PABPC4-208ENST00000461578 COX7CP15954 63 aa3.84□□□□□ -1.79
PABPC4-208ENST00000461578 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
PABPC4-208ENST00000461578 MT3P25713 68 aa3.77□□□□□ -1.81
PABPC4-208ENST00000461578 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
PABPC4-208ENST00000461578 UQCR11O14957 56 aa3.71□□□□□ -1.82
PABPC4-208ENST00000461578 LINC01558Q9Y6Z2 57 aa3.7□□□□□ -1.82
PABPC4-208ENST00000461578 K7ERS5 55 aa3.61□□□□□ -1.83
PABPC4-208ENST00000461578 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
PABPC4-208ENST00000461578 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
PABPC4-208ENST00000461578 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
PABPC4-208ENST00000461578 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
PABPC4-208ENST00000461578 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
PABPC4-208ENST00000461578 ANAPC13Q9BS18 74 aa3.45□□□□□ -1.86
PABPC4-208ENST00000461578 CCDC179H3BU77 68 aa3.43□□□□□ -1.86
PABPC4-208ENST00000461578 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
PABPC4-208ENST00000461578 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
PABPC4-208ENST00000461578 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
PABPC4-208ENST00000461578 Q1T7F1 81 aa3.31□□□□□ -1.88
PABPC4-208ENST00000461578 PSPHP1O15172 72 aa3.3□□□□□ -1.88
PABPC4-208ENST00000461578 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
PABPC4-208ENST00000461578 ROMO1P60602 79 aa3.28□□□□□ -1.88
PABPC4-208ENST00000461578 TMEM258P61165 79 aa3.21□□□□□ -1.9
PABPC4-208ENST00000461578 A6NED7 52 aa3.14□□□□□ -1.91
PABPC4-208ENST00000461578 V9GYY9 64 aa3.13□□□□□ -1.91
PABPC4-208ENST00000461578 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
PABPC4-208ENST00000461578 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
PABPC4-208ENST00000461578 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
PABPC4-208ENST00000461578 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
PABPC4-208ENST00000461578 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
PABPC4-208ENST00000461578 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
PABPC4-208ENST00000461578 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
PABPC4-208ENST00000461578 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
PABPC4-208ENST00000461578 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
PABPC4-208ENST00000461578 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
PABPC4-208ENST00000461578 BRK1Q8WUW1 75 aa2.12□□□□□ -2.07
PABPC4-208ENST00000461578 PRAC1Q96KF2 57 aa2.07□□□□□ -2.08
PABPC4-208ENST00000461578 PMAIP1Q13794 54 aa1.94□□□□□ -2.1
PABPC4-208ENST00000461578 PCP4P48539 62 aa1.91□□□□□ -2.1
PABPC4-208ENST00000461578 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
PABPC4-208ENST00000461578 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
PABPC4-208ENST00000461578 PRM1P04553 51 aa1.68□□□□□ -2.14
PABPC4-208ENST00000461578 SVIPQ8NHG7 77 aa1.48□□□□□ -2.17
PABPC4-208ENST00000461578 KTN1-AS1Q86SY8 53 aa1.36□□□□□ -2.19
PABPC4-208ENST00000461578 PRO0628Q9UI54 55 aa1.25□□□□□ -2.21
PABPC4-208ENST00000461578 NDUFAF8A1L188 74 aa0.86□□□□□ -2.27
PABPC4-208ENST00000461578 INE1O15225 51 aa0.5□□□□□ -2.33
PABPC4-208ENST00000461578 A0A0A0MQY5 61 aa0.27□□□□□ -2.37
PABPC4-208ENST00000461578 H3BS24 57 aa-0.8□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 101.4 ms