RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 TMEM258P61165 79 aa5.76□□□□□ -1.49
APTX-210ENST00000460945 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
APTX-210ENST00000460945 UQCR11O14957 56 aa5.72□□□□□ -1.49
APTX-210ENST00000460945 MT4P47944 62 aa5.68□□□□□ -1.5
APTX-210ENST00000460945 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
APTX-210ENST00000460945 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
APTX-210ENST00000460945 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
APTX-210ENST00000460945 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
APTX-210ENST00000460945 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
APTX-210ENST00000460945 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
APTX-210ENST00000460945 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
APTX-210ENST00000460945 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
APTX-210ENST00000460945 PSPHP1O15172 72 aa5.5□□□□□ -1.53
APTX-210ENST00000460945 PCP4P48539 62 aa5.5□□□□□ -1.53
APTX-210ENST00000460945 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
APTX-210ENST00000460945 K7ERS5 55 aa5.46□□□□□ -1.54
APTX-210ENST00000460945 Q1T7F1 81 aa5.44□□□□□ -1.54
APTX-210ENST00000460945 V9GYY9 64 aa5.44□□□□□ -1.54
APTX-210ENST00000460945 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
APTX-210ENST00000460945 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
APTX-210ENST00000460945 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
APTX-210ENST00000460945 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
APTX-210ENST00000460945 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
APTX-210ENST00000460945 A6NED7 52 aa5.28□□□□□ -1.56
APTX-210ENST00000460945 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
APTX-210ENST00000460945 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
APTX-210ENST00000460945 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
APTX-210ENST00000460945 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
APTX-210ENST00000460945 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
APTX-210ENST00000460945 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
APTX-210ENST00000460945 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
APTX-210ENST00000460945 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
APTX-210ENST00000460945 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
APTX-210ENST00000460945 ROMO1P60602 79 aa5.12□□□□□ -1.59
APTX-210ENST00000460945 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
APTX-210ENST00000460945 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
APTX-210ENST00000460945 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
APTX-210ENST00000460945 MT1AP04731 61 aa4.99□□□□□ -1.61
APTX-210ENST00000460945 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
APTX-210ENST00000460945 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
APTX-210ENST00000460945 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
APTX-210ENST00000460945 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
APTX-210ENST00000460945 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
APTX-210ENST00000460945 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
APTX-210ENST00000460945 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
APTX-210ENST00000460945 AHNAKQ09666 5890 aaKnown RBP4.59□□□□□ -1.68
APTX-210ENST00000460945 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
APTX-210ENST00000460945 MT3P25713 68 aa4.55□□□□□ -1.68
APTX-210ENST00000460945 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
APTX-210ENST00000460945 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
APTX-210ENST00000460945 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
APTX-210ENST00000460945 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
APTX-210ENST00000460945 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
APTX-210ENST00000460945 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
APTX-210ENST00000460945 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
APTX-210ENST00000460945 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
APTX-210ENST00000460945 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
APTX-210ENST00000460945 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
APTX-210ENST00000460945 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
APTX-210ENST00000460945 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
APTX-210ENST00000460945 H3BS24 57 aa3.82□□□□□ -1.8
APTX-210ENST00000460945 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
APTX-210ENST00000460945 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
APTX-210ENST00000460945 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
APTX-210ENST00000460945 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
APTX-210ENST00000460945 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
APTX-210ENST00000460945 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
APTX-210ENST00000460945 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
APTX-210ENST00000460945 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
APTX-210ENST00000460945 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
APTX-210ENST00000460945 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
APTX-210ENST00000460945 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
APTX-210ENST00000460945 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
APTX-210ENST00000460945 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
APTX-210ENST00000460945 INE1O15225 51 aa2.82□□□□□ -1.96
APTX-210ENST00000460945 PRM1P04553 51 aa2.65□□□□□ -1.99
APTX-210ENST00000460945 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
APTX-210ENST00000460945 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms