RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
ATG4B-213ENST00000460211 PSPHP1O15172 72 aa5.46□□□□□ -1.54
ATG4B-213ENST00000460211 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
ATG4B-213ENST00000460211 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
ATG4B-213ENST00000460211 MT1GP13640 62 aa5.4□□□□□ -1.54
ATG4B-213ENST00000460211 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
ATG4B-213ENST00000460211 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
ATG4B-213ENST00000460211 A6NED7 52 aa5.32□□□□□ -1.56
ATG4B-213ENST00000460211 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
ATG4B-213ENST00000460211 MT1LQ93083 61 aa5.32□□□□□ -1.56
ATG4B-213ENST00000460211 MT4P47944 62 aa5.3□□□□□ -1.56
ATG4B-213ENST00000460211 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
ATG4B-213ENST00000460211 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
ATG4B-213ENST00000460211 MT1MQ8N339 61 aa5.26□□□□□ -1.57
ATG4B-213ENST00000460211 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
ATG4B-213ENST00000460211 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
ATG4B-213ENST00000460211 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
ATG4B-213ENST00000460211 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
ATG4B-213ENST00000460211 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
ATG4B-213ENST00000460211 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
ATG4B-213ENST00000460211 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
ATG4B-213ENST00000460211 ROMO1P60602 79 aa5.05□□□□□ -1.6
ATG4B-213ENST00000460211 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
ATG4B-213ENST00000460211 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
ATG4B-213ENST00000460211 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
ATG4B-213ENST00000460211 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
ATG4B-213ENST00000460211 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
ATG4B-213ENST00000460211 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
ATG4B-213ENST00000460211 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
ATG4B-213ENST00000460211 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
ATG4B-213ENST00000460211 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
ATG4B-213ENST00000460211 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
ATG4B-213ENST00000460211 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
ATG4B-213ENST00000460211 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
ATG4B-213ENST00000460211 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
ATG4B-213ENST00000460211 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
ATG4B-213ENST00000460211 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
ATG4B-213ENST00000460211 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
ATG4B-213ENST00000460211 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
ATG4B-213ENST00000460211 MT1AP04731 61 aa4.54□□□□□ -1.68
ATG4B-213ENST00000460211 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
ATG4B-213ENST00000460211 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
ATG4B-213ENST00000460211 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
ATG4B-213ENST00000460211 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
ATG4B-213ENST00000460211 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
ATG4B-213ENST00000460211 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
ATG4B-213ENST00000460211 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
ATG4B-213ENST00000460211 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
ATG4B-213ENST00000460211 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
ATG4B-213ENST00000460211 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
ATG4B-213ENST00000460211 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
ATG4B-213ENST00000460211 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
ATG4B-213ENST00000460211 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
ATG4B-213ENST00000460211 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
ATG4B-213ENST00000460211 MT3P25713 68 aa4.18□□□□□ -1.74
ATG4B-213ENST00000460211 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
ATG4B-213ENST00000460211 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
ATG4B-213ENST00000460211 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
ATG4B-213ENST00000460211 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
ATG4B-213ENST00000460211 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
ATG4B-213ENST00000460211 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
ATG4B-213ENST00000460211 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
ATG4B-213ENST00000460211 H3BS24 57 aa3.45□□□□□ -1.86
ATG4B-213ENST00000460211 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
ATG4B-213ENST00000460211 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
ATG4B-213ENST00000460211 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
ATG4B-213ENST00000460211 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
ATG4B-213ENST00000460211 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
ATG4B-213ENST00000460211 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
ATG4B-213ENST00000460211 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
ATG4B-213ENST00000460211 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
ATG4B-213ENST00000460211 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
ATG4B-213ENST00000460211 INE1O15225 51 aa2.71□□□□□ -1.98
ATG4B-213ENST00000460211 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
ATG4B-213ENST00000460211 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
ATG4B-213ENST00000460211 PRM1P04553 51 aa2.57□□□□□ -2
ATG4B-213ENST00000460211 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
ATG4B-213ENST00000460211 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 193.5 ms