RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 CDC42SE1Q9NRR8 79 aa1.92□□□□□ -2.1
RNU6ATAC28P-201ENST00000459249 KRTAP5-9P26371 169 aa1.9□□□□□ -2.11
RNU6ATAC28P-201ENST00000459249 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
RNU6ATAC28P-201ENST00000459249 LCE1EQ5T753 118 aa1.85□□□□□ -2.11
RNU6ATAC28P-201ENST00000459249 A0A1B0GU69 56 aa1.84□□□□□ -2.11
RNU6ATAC28P-201ENST00000459249 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.11
RNU6ATAC28P-201ENST00000459249 KRTAP5-3Q6L8H2 238 aa1.83□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 KRTAP8-1Q8IUC2 63 aa1.83□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 SPATA8Q6RVD6 105 aa1.82□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 MACF1Q9UPN3 7388 aaKnown RBP1.82□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 A0A0D9SG42 100 aa1.81□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 KRTAP12-1P59990 96 aa1.81□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 PRR15LQ9BU68 103 aa1.81□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 PP632Q6XCG6 107 aa1.79□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 SPRR2EP22531 72 aa1.78□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 SPRR2BP35325 72 aa1.78□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 SPRR2AP35326 72 aa1.78□□□□□ -2.12
RNU6ATAC28P-201ENST00000459249 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 KMT2DO14686 5537 aa1.77□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 UQCR11O14957 56 aa1.75□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
RNU6ATAC28P-201ENST00000459249 MT1EP04732 61 aa1.71□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 TNP1P09430 55 aa1.71□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 SPRR2DP22532 72 aa1.71□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 KRTAP19-3Q7Z4W3 81 aa1.69□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 NEBP20929 6669 aa1.68□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 LCE3AQ5TA76 89 aa1.67□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 MT1GP13640 62 aa1.66□□□□□ -2.14
RNU6ATAC28P-201ENST00000459249 MT1LQ93083 61 aa1.64□□□□□ -2.15
RNU6ATAC28P-201ENST00000459249 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
RNU6ATAC28P-201ENST00000459249 MT1MQ8N339 61 aa1.62□□□□□ -2.15
RNU6ATAC28P-201ENST00000459249 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
RNU6ATAC28P-201ENST00000459249 KRTAP5-4Q6L8H1 288 aa1.54□□□□□ -2.16
RNU6ATAC28P-201ENST00000459249 KRTAP4-3Q9BYR4 195 aa1.54□□□□□ -2.16
RNU6ATAC28P-201ENST00000459249 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
RNU6ATAC28P-201ENST00000459249 KRTAP5-5Q701N2 237 aaPredicted RBP1.51□□□□□ -2.17
RNU6ATAC28P-201ENST00000459249 MT4P47944 62 aa1.48□□□□□ -2.17
RNU6ATAC28P-201ENST00000459249 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
RNU6ATAC28P-201ENST00000459249 KRTAP20-2Q3LI61 65 aa1.43□□□□□ -2.18
RNU6ATAC28P-201ENST00000459249 MT1AP04731 61 aa1.41□□□□□ -2.18
RNU6ATAC28P-201ENST00000459249 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.19
RNU6ATAC28P-201ENST00000459249 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
RNU6ATAC28P-201ENST00000459249 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
RNU6ATAC28P-201ENST00000459249 KRTAP5-2Q701N4 177 aa1.37□□□□□ -2.19
RNU6ATAC28P-201ENST00000459249 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
RNU6ATAC28P-201ENST00000459249 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
RNU6ATAC28P-201ENST00000459249 KRTAP5-8O75690 187 aa1.25□□□□□ -2.21
RNU6ATAC28P-201ENST00000459249 MUC5ACP98088 5654 aa1.09□□□□□ -2.24
RNU6ATAC28P-201ENST00000459249 OBSCNQ5VST9 7968 aa1.07□□□□□ -2.24
RNU6ATAC28P-201ENST00000459249 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
RNU6ATAC28P-201ENST00000459249 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.24
RNU6ATAC28P-201ENST00000459249 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
RNU6ATAC28P-201ENST00000459249 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
RNU6ATAC28P-201ENST00000459249 MUC19Q7Z5P9 8384 aa0.86□□□□□ -2.27
RNU6ATAC28P-201ENST00000459249 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
RNU6ATAC28P-201ENST00000459249 PRM1P04553 51 aa0.79□□□□□ -2.28
RNU6ATAC28P-201ENST00000459249 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
RNU6ATAC28P-201ENST00000459249 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 159.6 ms