RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 A8MU10 97 aa7.27□□□□□ -1.25
CPNE1-220ENST00000458038 KRTAP5-7Q6L8G8 165 aa7.27□□□□□ -1.25
CPNE1-220ENST00000458038 COX7CP15954 63 aa7.25□□□□□ -1.25
CPNE1-220ENST00000458038 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
CPNE1-220ENST00000458038 H7BZZ5 65 aa7.22□□□□□ -1.25
CPNE1-220ENST00000458038 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
CPNE1-220ENST00000458038 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
CPNE1-220ENST00000458038 KRTAP20-2Q3LI61 65 aa7.14□□□□□ -1.27
CPNE1-220ENST00000458038 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
CPNE1-220ENST00000458038 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
CPNE1-220ENST00000458038 KRTAP12-4P60329 112 aa7.06□□□□□ -1.28
CPNE1-220ENST00000458038 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
CPNE1-220ENST00000458038 ANAPC13Q9BS18 74 aa6.98□□□□□ -1.29
CPNE1-220ENST00000458038 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
CPNE1-220ENST00000458038 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
CPNE1-220ENST00000458038 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
CPNE1-220ENST00000458038 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
CPNE1-220ENST00000458038 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
CPNE1-220ENST00000458038 UQCR11O14957 56 aa6.77□□□□□ -1.33
CPNE1-220ENST00000458038 ATP5EP56381 51 aaPredicted RBP6.77□□□□□ -1.33
CPNE1-220ENST00000458038 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
CPNE1-220ENST00000458038 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
CPNE1-220ENST00000458038 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
CPNE1-220ENST00000458038 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
CPNE1-220ENST00000458038 K7ERS5 55 aa6.57□□□□□ -1.36
CPNE1-220ENST00000458038 TMEM258P61165 79 aa6.57□□□□□ -1.36
CPNE1-220ENST00000458038 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
CPNE1-220ENST00000458038 KRTAP5-2Q701N4 177 aa6.55□□□□□ -1.36
CPNE1-220ENST00000458038 MIR22HGQ0VDD5 57 aa6.54□□□□□ -1.36
CPNE1-220ENST00000458038 MT1AP04731 61 aa6.49□□□□□ -1.37
CPNE1-220ENST00000458038 KRTAP6-1Q3LI64 71 aa6.44□□□□□ -1.38
CPNE1-220ENST00000458038 KRTAP5-8O75690 187 aa6.39□□□□□ -1.39
CPNE1-220ENST00000458038 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
CPNE1-220ENST00000458038 MUC5ACP98088 5654 aa6.25□□□□□ -1.41
CPNE1-220ENST00000458038 KRTAP6-2Q3LI66 62 aa6.24□□□□□ -1.41
CPNE1-220ENST00000458038 PSPHP1O15172 72 aa6.23□□□□□ -1.41
CPNE1-220ENST00000458038 V9GYY9 64 aa6.21□□□□□ -1.42
CPNE1-220ENST00000458038 MUC5BQ9HC84 5762 aaPredicted RBP6.21□□□□□ -1.42
CPNE1-220ENST00000458038 AHNAKQ09666 5890 aaKnown RBP6.2□□□□□ -1.42
CPNE1-220ENST00000458038 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
CPNE1-220ENST00000458038 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
CPNE1-220ENST00000458038 Q1T7F1 81 aa6.17□□□□□ -1.42
CPNE1-220ENST00000458038 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
CPNE1-220ENST00000458038 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
CPNE1-220ENST00000458038 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
CPNE1-220ENST00000458038 A6NED7 52 aa6□□□□□ -1.45
CPNE1-220ENST00000458038 MT3P25713 68 aa5.99□□□□□ -1.45
CPNE1-220ENST00000458038 ROMO1P60602 79 aa5.98□□□□□ -1.45
CPNE1-220ENST00000458038 KRTAP5-1Q6L8H4 278 aa5.93□□□□□ -1.46
CPNE1-220ENST00000458038 PCP4P48539 62 aa5.8□□□□□ -1.48
CPNE1-220ENST00000458038 LCE1EQ5T753 118 aa5.62□□□□□ -1.51
CPNE1-220ENST00000458038 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
CPNE1-220ENST00000458038 LCE1BQ5T7P3 118 aa5.24□□□□□ -1.57
CPNE1-220ENST00000458038 LCE1CQ5T751 118 aa5.2□□□□□ -1.58
CPNE1-220ENST00000458038 H3BS24 57 aa5.18□□□□□ -1.58
CPNE1-220ENST00000458038 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
CPNE1-220ENST00000458038 SVIPQ8NHG7 77 aa5□□□□□ -1.61
CPNE1-220ENST00000458038 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
CPNE1-220ENST00000458038 PMAIP1Q13794 54 aa4.83□□□□□ -1.64
CPNE1-220ENST00000458038 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
CPNE1-220ENST00000458038 KRTAP5-11Q6L8G4 156 aa4.73□□□□□ -1.65
CPNE1-220ENST00000458038 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
CPNE1-220ENST00000458038 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
CPNE1-220ENST00000458038 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CPNE1-220ENST00000458038 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
CPNE1-220ENST00000458038 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
CPNE1-220ENST00000458038 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
CPNE1-220ENST00000458038 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
CPNE1-220ENST00000458038 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
CPNE1-220ENST00000458038 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
CPNE1-220ENST00000458038 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
CPNE1-220ENST00000458038 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
CPNE1-220ENST00000458038 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
CPNE1-220ENST00000458038 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
CPNE1-220ENST00000458038 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
CPNE1-220ENST00000458038 PRM1P04553 51 aa2.99□□□□□ -1.93
CPNE1-220ENST00000458038 MUC16Q8WXI7 14507 aa2.73□□□□□ -1.97
CPNE1-220ENST00000458038 INE1O15225 51 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms