RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
HMGB3P30-201ENST00000457863 CSMD2Q7Z408 3487 aa0.69□□□□□ -2.3
HMGB3P30-201ENST00000457863 VPS13CQ709C8 3753 aa0.69□□□□□ -2.3
HMGB3P30-201ENST00000457863 SPRR2AP35326 72 aa0.69□□□□□ -2.3
HMGB3P30-201ENST00000457863 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
HMGB3P30-201ENST00000457863 SMR3BP02814 79 aaPredicted RBP0.67□□□□□ -2.3
HMGB3P30-201ENST00000457863 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
HMGB3P30-201ENST00000457863 DNAH10Q8IVF4 4471 aa0.67□□□□□ -2.3
HMGB3P30-201ENST00000457863 PKHD1P08F94 4074 aa0.67□□□□□ -2.3
HMGB3P30-201ENST00000457863 APOBP04114 4563 aaKnown RBP0.66□□□□□ -2.3
HMGB3P30-201ENST00000457863 CMYA5Q8N3K9 4069 aa0.65□□□□□ -2.31
HMGB3P30-201ENST00000457863 DNAH17Q9UFH2 4485 aa0.65□□□□□ -2.31
HMGB3P30-201ENST00000457863 TRRAPQ9Y4A5 3859 aa0.64□□□□□ -2.31
HMGB3P30-201ENST00000457863 FAT3Q8TDW7 4589 aa0.63□□□□□ -2.31
HMGB3P30-201ENST00000457863 LRP1BQ9NZR2 4599 aa0.62□□□□□ -2.31
HMGB3P30-201ENST00000457863 MT1HL1P0DM35 61 aa0.62□□□□□ -2.31
HMGB3P30-201ENST00000457863 KRTAP19-2Q3LHN2 52 aa0.62□□□□□ -2.31
HMGB3P30-201ENST00000457863 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
HMGB3P30-201ENST00000457863 SPRR2GQ9BYE4 73 aa0.61□□□□□ -2.31
HMGB3P30-201ENST00000457863 STARD9Q9P2P6 4700 aa0.61□□□□□ -2.31
HMGB3P30-201ENST00000457863 SPRR2EP22531 72 aa0.6□□□□□ -2.31
HMGB3P30-201ENST00000457863 PLECQ15149 4684 aaKnown RBP0.59□□□□□ -2.31
HMGB3P30-201ENST00000457863 MT1XP80297 61 aa0.57□□□□□ -2.32
HMGB3P30-201ENST00000457863 KRTAP19-8Q3LI54 63 aa0.57□□□□□ -2.32
HMGB3P30-201ENST00000457863 AHNAK2Q8IVF2 5795 aa0.55□□□□□ -2.32
HMGB3P30-201ENST00000457863 HERC1Q15751 4861 aa0.54□□□□□ -2.32
HMGB3P30-201ENST00000457863 FAT1Q14517 4588 aa0.54□□□□□ -2.32
HMGB3P30-201ENST00000457863 MT1BP07438 61 aa0.54□□□□□ -2.32
HMGB3P30-201ENST00000457863 DYNC1H1Q14204 4646 aaKnown RBP0.53□□□□□ -2.32
HMGB3P30-201ENST00000457863 DNAH5Q8TE73 4624 aa0.53□□□□□ -2.32
HMGB3P30-201ENST00000457863 MT2AP02795 61 aa0.53□□□□□ -2.32
HMGB3P30-201ENST00000457863 MT1FP04733 61 aa0.53□□□□□ -2.32
HMGB3P30-201ENST00000457863 MUC17Q685J3 4493 aa0.52□□□□□ -2.33
HMGB3P30-201ENST00000457863 MT1EP04732 61 aa0.5□□□□□ -2.33
HMGB3P30-201ENST00000457863 MT1HP80294 61 aa0.5□□□□□ -2.33
HMGB3P30-201ENST00000457863 KRTAP19-7Q3SYF9 63 aa0.5□□□□□ -2.33
HMGB3P30-201ENST00000457863 MT1LQ93083 61 aa0.5□□□□□ -2.33
HMGB3P30-201ENST00000457863 FAT4Q6V0I7 4981 aa0.5□□□□□ -2.33
HMGB3P30-201ENST00000457863 GPR98Q8WXG9 6306 aa0.49□□□□□ -2.33
HMGB3P30-201ENST00000457863 HMCN2Q8NDA2 5059 aa0.48□□□□□ -2.33
HMGB3P30-201ENST00000457863 LRP2P98164 4655 aa0.48□□□□□ -2.33
HMGB3P30-201ENST00000457863 MT1GP13640 62 aa0.46□□□□□ -2.34
HMGB3P30-201ENST00000457863 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
HMGB3P30-201ENST00000457863 DNHD1Q96M86 4753 aa0.45□□□□□ -2.34
HMGB3P30-201ENST00000457863 MT1MQ8N339 61 aa0.44□□□□□ -2.34
HMGB3P30-201ENST00000457863 AHNAKQ09666 5890 aaKnown RBP0.42□□□□□ -2.34
HMGB3P30-201ENST00000457863 KRTAP6-1Q3LI64 71 aa0.42□□□□□ -2.34
HMGB3P30-201ENST00000457863 KMT2CQ8NEZ4 4911 aaKnown RBP0.41□□□□□ -2.34
HMGB3P30-201ENST00000457863 RYR2Q92736 4967 aa0.4□□□□□ -2.34
HMGB3P30-201ENST00000457863 PCLOQ9Y6V0 5065 aa0.4□□□□□ -2.34
HMGB3P30-201ENST00000457863 USH2AO75445 5202 aa0.4□□□□□ -2.35
HMGB3P30-201ENST00000457863 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
HMGB3P30-201ENST00000457863 BIRC6Q9NR09 4857 aa0.4□□□□□ -2.35
HMGB3P30-201ENST00000457863 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
HMGB3P30-201ENST00000457863 HERC2O95714 4834 aa0.39□□□□□ -2.35
HMGB3P30-201ENST00000457863 HYDINQ4G0P3 5121 aa0.39□□□□□ -2.35
HMGB3P30-201ENST00000457863 RYR3Q15413 4870 aa0.38□□□□□ -2.35
HMGB3P30-201ENST00000457863 MUC2Q02817 5179 aa0.38□□□□□ -2.35
HMGB3P30-201ENST00000457863 RYR1P21817 5038 aa0.38□□□□□ -2.35
HMGB3P30-201ENST00000457863 KIAA1109Q2LD37 5005 aa0.38□□□□□ -2.35
HMGB3P30-201ENST00000457863 KRTAP19-6Q3LI70 58 aa0.37□□□□□ -2.35
HMGB3P30-201ENST00000457863 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
HMGB3P30-201ENST00000457863 KMT2DO14686 5537 aa0.35□□□□□ -2.35
HMGB3P30-201ENST00000457863 SSPOA2VEC9 5147 aa0.34□□□□□ -2.35
HMGB3P30-201ENST00000457863 UBR4Q5T4S7 5183 aa0.34□□□□□ -2.36
HMGB3P30-201ENST00000457863 EPPK1P58107 5090 aaKnown RBP0.34□□□□□ -2.36
HMGB3P30-201ENST00000457863 ABCA13Q86UQ4 5058 aa0.34□□□□□ -2.36
HMGB3P30-201ENST00000457863 RNF213Q63HN8 5207 aa0.32□□□□□ -2.36
HMGB3P30-201ENST00000457863 MUC12Q9UKN1 5478 aa0.31□□□□□ -2.36
HMGB3P30-201ENST00000457863 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
HMGB3P30-201ENST00000457863 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
HMGB3P30-201ENST00000457863 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
HMGB3P30-201ENST00000457863 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
HMGB3P30-201ENST00000457863 MT4P47944 62 aa0.23□□□□□ -2.37
HMGB3P30-201ENST00000457863 KRTAP20-1Q3LI63 56 aa0.22□□□□□ -2.37
HMGB3P30-201ENST00000457863 DSTQ03001 7570 aaKnown RBP0.2□□□□□ -2.38
HMGB3P30-201ENST00000457863 NEBP20929 6669 aa0.14□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 72.4 ms