RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PCLOQ9Y6V0 5065 aa1.56□□□□□ -2.16
PCDH9-203ENST00000456367 MUC17Q685J3 4493 aa1.56□□□□□ -2.16
PCDH9-203ENST00000456367 FLGP20930 4061 aaPredicted RBP1.56□□□□□ -2.16
PCDH9-203ENST00000456367 KRTAP4-8A0A0G2JLE6 195 aa1.56□□□□□ -2.16
PCDH9-203ENST00000456367 PRM1P04553 51 aa1.55□□□□□ -2.16
PCDH9-203ENST00000456367 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
PCDH9-203ENST00000456367 HERC2O95714 4834 aa1.54□□□□□ -2.16
PCDH9-203ENST00000456367 ABCA13Q86UQ4 5058 aa1.53□□□□□ -2.16
PCDH9-203ENST00000456367 LPAP08519 4548 aa1.53□□□□□ -2.16
PCDH9-203ENST00000456367 LRP2P98164 4655 aa1.52□□□□□ -2.17
PCDH9-203ENST00000456367 LCE1AQ5T7P2 110 aa1.51□□□□□ -2.17
PCDH9-203ENST00000456367 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
PCDH9-203ENST00000456367 SPRR2EP22531 72 aa1.51□□□□□ -2.17
PCDH9-203ENST00000456367 SPRR2BP35325 72 aa1.51□□□□□ -2.17
PCDH9-203ENST00000456367 SPRR2AP35326 72 aa1.51□□□□□ -2.17
PCDH9-203ENST00000456367 KRTAP4-7Q9BYR0 210 aa1.51□□□□□ -2.17
PCDH9-203ENST00000456367 MT1AP04731 61 aa1.5□□□□□ -2.17
PCDH9-203ENST00000456367 MT1MQ8N339 61 aa1.5□□□□□ -2.17
PCDH9-203ENST00000456367 KRTAP19-7Q3SYF9 63 aa1.48□□□□□ -2.17
PCDH9-203ENST00000456367 LCE1FQ5T754 118 aa1.48□□□□□ -2.17
PCDH9-203ENST00000456367 SPRR2DP22532 72 aa1.47□□□□□ -2.17
PCDH9-203ENST00000456367 LCE1EQ5T753 118 aa1.46□□□□□ -2.17
PCDH9-203ENST00000456367 KRTAP4-9Q9BYQ8 210 aa1.46□□□□□ -2.18
PCDH9-203ENST00000456367 GPR98Q8WXG9 6306 aa1.46□□□□□ -2.18
PCDH9-203ENST00000456367 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
PCDH9-203ENST00000456367 KRTAP9-6A8MVA2 160 aa1.44□□□□□ -2.18
PCDH9-203ENST00000456367 KRTAP6-3Q3LI67 103 aa1.43□□□□□ -2.18
PCDH9-203ENST00000456367 UBR4Q5T4S7 5183 aa1.42□□□□□ -2.18
PCDH9-203ENST00000456367 HMCN2Q8NDA2 5059 aa1.41□□□□□ -2.18
PCDH9-203ENST00000456367 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
PCDH9-203ENST00000456367 LCE4AQ5TA78 99 aa1.4□□□□□ -2.19
PCDH9-203ENST00000456367 RNF213Q63HN8 5207 aa1.4□□□□□ -2.19
PCDH9-203ENST00000456367 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
PCDH9-203ENST00000456367 LCE1DQ5T752 114 aa1.39□□□□□ -2.19
PCDH9-203ENST00000456367 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
PCDH9-203ENST00000456367 MUC2Q02817 5179 aa1.39□□□□□ -2.19
PCDH9-203ENST00000456367 KRTAP4-3Q9BYR4 195 aa1.37□□□□□ -2.19
PCDH9-203ENST00000456367 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
PCDH9-203ENST00000456367 KRTAP4-11Q9BYQ6 195 aa1.37□□□□□ -2.19
PCDH9-203ENST00000456367 KRTAP5-2Q701N4 177 aa1.36□□□□□ -2.19
PCDH9-203ENST00000456367 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
PCDH9-203ENST00000456367 KRTAP5-9P26371 169 aa1.34□□□□□ -2.19
PCDH9-203ENST00000456367 MT4P47944 62 aa1.34□□□□□ -2.19
PCDH9-203ENST00000456367 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
PCDH9-203ENST00000456367 FAT4Q6V0I7 4981 aa1.32□□□□□ -2.2
PCDH9-203ENST00000456367 FSIP2Q5CZC0 6907 aa1.32□□□□□ -2.2
PCDH9-203ENST00000456367 KRTAP6-1Q3LI64 71 aa1.31□□□□□ -2.2
PCDH9-203ENST00000456367 NEBP20929 6669 aa1.3□□□□□ -2.2
PCDH9-203ENST00000456367 SSPOA2VEC9 5147 aa1.25□□□□□ -2.21
PCDH9-203ENST00000456367 LCE1BQ5T7P3 118 aa1.24□□□□□ -2.21
PCDH9-203ENST00000456367 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
PCDH9-203ENST00000456367 OBSCNQ5VST9 7968 aa1.22□□□□□ -2.21
PCDH9-203ENST00000456367 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
PCDH9-203ENST00000456367 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
PCDH9-203ENST00000456367 USH2AO75445 5202 aa1.17□□□□□ -2.22
PCDH9-203ENST00000456367 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
PCDH9-203ENST00000456367 KRTAP5-5Q701N2 237 aaPredicted RBP1.16□□□□□ -2.22
PCDH9-203ENST00000456367 MUC5BQ9HC84 5762 aaPredicted RBP1.15□□□□□ -2.23
PCDH9-203ENST00000456367 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
PCDH9-203ENST00000456367 KRTAP5-4Q6L8H1 288 aa1.13□□□□□ -2.23
PCDH9-203ENST00000456367 KRTAP5-7Q6L8G8 165 aa1.11□□□□□ -2.23
PCDH9-203ENST00000456367 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
PCDH9-203ENST00000456367 KMT2DO14686 5537 aa1.1□□□□□ -2.23
PCDH9-203ENST00000456367 FCGBPQ9Y6R7 5405 aaPredicted RBP1.08□□□□□ -2.24
PCDH9-203ENST00000456367 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
PCDH9-203ENST00000456367 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
PCDH9-203ENST00000456367 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.24
PCDH9-203ENST00000456367 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
PCDH9-203ENST00000456367 MUC12Q9UKN1 5478 aa1□□□□□ -2.25
PCDH9-203ENST00000456367 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
PCDH9-203ENST00000456367 KRTAP5-1Q6L8H4 278 aa0.98□□□□□ -2.25
PCDH9-203ENST00000456367 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
PCDH9-203ENST00000456367 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
PCDH9-203ENST00000456367 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
PCDH9-203ENST00000456367 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
PCDH9-203ENST00000456367 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
PCDH9-203ENST00000456367 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 165.5 ms