RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 RYR3Q15413 4870 aa0.98□□□□□ -2.25
R3HDM1-212ENST00000456040 FAT3Q8TDW7 4589 aa0.98□□□□□ -2.25
R3HDM1-212ENST00000456040 MYCBP2O75592 4640 aa0.97□□□□□ -2.25
R3HDM1-212ENST00000456040 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
R3HDM1-212ENST00000456040 CRIPTQ9P021 101 aa0.97□□□□□ -2.25
R3HDM1-212ENST00000456040 LRP1Q07954 4544 aaKnown RBP0.96□□□□□ -2.26
R3HDM1-212ENST00000456040 RYR1P21817 5038 aa0.96□□□□□ -2.26
R3HDM1-212ENST00000456040 KIAA1109Q2LD37 5005 aa0.95□□□□□ -2.26
R3HDM1-212ENST00000456040 A0A0D9SG42 100 aa0.94□□□□□ -2.26
R3HDM1-212ENST00000456040 M0R2T5 61 aa0.94□□□□□ -2.26
R3HDM1-212ENST00000456040 C10orf95Q9H7T3 257 aa0.93□□□□□ -2.26
R3HDM1-212ENST00000456040 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
R3HDM1-212ENST00000456040 HERC2O95714 4834 aa0.91□□□□□ -2.26
R3HDM1-212ENST00000456040 FLGP20930 4061 aaPredicted RBP0.91□□□□□ -2.26
R3HDM1-212ENST00000456040 EPPK1P58107 5090 aaKnown RBP0.91□□□□□ -2.26
R3HDM1-212ENST00000456040 LRP2P98164 4655 aa0.9□□□□□ -2.27
R3HDM1-212ENST00000456040 BIRC6Q9NR09 4857 aa0.89□□□□□ -2.27
R3HDM1-212ENST00000456040 MUC17Q685J3 4493 aa0.88□□□□□ -2.27
R3HDM1-212ENST00000456040 TNP1P09430 55 aa0.88□□□□□ -2.27
R3HDM1-212ENST00000456040 ABCA13Q86UQ4 5058 aa0.87□□□□□ -2.27
R3HDM1-212ENST00000456040 LPAP08519 4548 aa0.87□□□□□ -2.27
R3HDM1-212ENST00000456040 MT1HP80294 61 aa0.86□□□□□ -2.27
R3HDM1-212ENST00000456040 KRTAP19-2Q3LHN2 52 aa0.86□□□□□ -2.27
R3HDM1-212ENST00000456040 SPRR2GQ9BYE4 73 aa0.86□□□□□ -2.27
R3HDM1-212ENST00000456040 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
R3HDM1-212ENST00000456040 HERC1Q15751 4861 aa0.86□□□□□ -2.27
R3HDM1-212ENST00000456040 HMCN2Q8NDA2 5059 aa0.85□□□□□ -2.27
R3HDM1-212ENST00000456040 PCLOQ9Y6V0 5065 aa0.84□□□□□ -2.27
R3HDM1-212ENST00000456040 MUC2Q02817 5179 aa0.84□□□□□ -2.27
R3HDM1-212ENST00000456040 MT2AP02795 61 aa0.83□□□□□ -2.28
R3HDM1-212ENST00000456040 KRTAP19-8Q3LI54 63 aa0.83□□□□□ -2.28
R3HDM1-212ENST00000456040 RNF213Q63HN8 5207 aa0.82□□□□□ -2.28
R3HDM1-212ENST00000456040 MT1FP04733 61 aa0.81□□□□□ -2.28
R3HDM1-212ENST00000456040 UBR4Q5T4S7 5183 aa0.8□□□□□ -2.28
R3HDM1-212ENST00000456040 FAT4Q6V0I7 4981 aa0.77□□□□□ -2.29
R3HDM1-212ENST00000456040 MT1BP07438 61 aa0.77□□□□□ -2.29
R3HDM1-212ENST00000456040 KRTAP8-1Q8IUC2 63 aa0.77□□□□□ -2.29
R3HDM1-212ENST00000456040 MT1XP80297 61 aa0.76□□□□□ -2.29
R3HDM1-212ENST00000456040 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
R3HDM1-212ENST00000456040 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
R3HDM1-212ENST00000456040 USH2AO75445 5202 aa0.7□□□□□ -2.3
R3HDM1-212ENST00000456040 MT1GP13640 62 aa0.69□□□□□ -2.3
R3HDM1-212ENST00000456040 MT1EP04732 61 aa0.68□□□□□ -2.3
R3HDM1-212ENST00000456040 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
R3HDM1-212ENST00000456040 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
R3HDM1-212ENST00000456040 MT1LQ93083 61 aa0.67□□□□□ -2.3
R3HDM1-212ENST00000456040 SPRR2FQ96RM1 72 aa0.67□□□□□ -2.3
R3HDM1-212ENST00000456040 SSPOA2VEC9 5147 aa0.67□□□□□ -2.3
R3HDM1-212ENST00000456040 KRTAP2-3P0C7H8 128 aa0.64□□□□□ -2.31
R3HDM1-212ENST00000456040 MT1MQ8N339 61 aa0.64□□□□□ -2.31
R3HDM1-212ENST00000456040 KRTAP2-4Q9BYR9 128 aa0.64□□□□□ -2.31
R3HDM1-212ENST00000456040 KRTAP2-1Q9BYU5 128 aa0.64□□□□□ -2.31
R3HDM1-212ENST00000456040 SPRR2EP22531 72 aa0.63□□□□□ -2.31
R3HDM1-212ENST00000456040 SPRR2BP35325 72 aa0.63□□□□□ -2.31
R3HDM1-212ENST00000456040 SPRR2AP35326 72 aa0.63□□□□□ -2.31
R3HDM1-212ENST00000456040 SPRR2DP22532 72 aa0.62□□□□□ -2.31
R3HDM1-212ENST00000456040 KMT2DO14686 5537 aa0.62□□□□□ -2.31
R3HDM1-212ENST00000456040 MDN1Q9NU22 5596 aa0.6□□□□□ -2.31
R3HDM1-212ENST00000456040 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
R3HDM1-212ENST00000456040 MT1AP04731 61 aa0.59□□□□□ -2.31
R3HDM1-212ENST00000456040 MUC12Q9UKN1 5478 aa0.59□□□□□ -2.32
R3HDM1-212ENST00000456040 MACF1Q9UPN3 7388 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-212ENST00000456040 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
R3HDM1-212ENST00000456040 DSTQ03001 7570 aaKnown RBP0.54□□□□□ -2.32
R3HDM1-212ENST00000456040 KRTAP20-1Q3LI63 56 aa0.54□□□□□ -2.32
R3HDM1-212ENST00000456040 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
R3HDM1-212ENST00000456040 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
R3HDM1-212ENST00000456040 MT4P47944 62 aa0.5□□□□□ -2.33
R3HDM1-212ENST00000456040 KRTAP20-2Q3LI61 65 aa0.5□□□□□ -2.33
R3HDM1-212ENST00000456040 NEBP20929 6669 aa0.5□□□□□ -2.33
R3HDM1-212ENST00000456040 PRM1P04553 51 aa0.49□□□□□ -2.33
R3HDM1-212ENST00000456040 SYNE1Q8NF91 8797 aaKnown RBP0.45□□□□□ -2.34
R3HDM1-212ENST00000456040 AHNAKQ09666 5890 aaKnown RBP0.42□□□□□ -2.34
R3HDM1-212ENST00000456040 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
R3HDM1-212ENST00000456040 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
R3HDM1-212ENST00000456040 MUC5BQ9HC84 5762 aaPredicted RBP0.36□□□□□ -2.35
R3HDM1-212ENST00000456040 GPR98Q8WXG9 6306 aa0.36□□□□□ -2.35
R3HDM1-212ENST00000456040 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 9.6 ms