RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
PTPRE-204ENST00000455661 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
PTPRE-204ENST00000455661 MT1LQ93083 61 aa4.63□□□□□ -1.67
PTPRE-204ENST00000455661 USH2AO75445 5202 aa4.6□□□□□ -1.67
PTPRE-204ENST00000455661 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
PTPRE-204ENST00000455661 MT1EP04732 61 aa4.58□□□□□ -1.68
PTPRE-204ENST00000455661 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
PTPRE-204ENST00000455661 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
PTPRE-204ENST00000455661 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
PTPRE-204ENST00000455661 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
PTPRE-204ENST00000455661 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
PTPRE-204ENST00000455661 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
PTPRE-204ENST00000455661 MT1GP13640 62 aa4.35□□□□□ -1.71
PTPRE-204ENST00000455661 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
PTPRE-204ENST00000455661 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
PTPRE-204ENST00000455661 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
PTPRE-204ENST00000455661 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
PTPRE-204ENST00000455661 MT1MQ8N339 61 aa4.27□□□□□ -1.73
PTPRE-204ENST00000455661 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
PTPRE-204ENST00000455661 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
PTPRE-204ENST00000455661 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
PTPRE-204ENST00000455661 MT1AP04731 61 aa4.07□□□□□ -1.76
PTPRE-204ENST00000455661 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
PTPRE-204ENST00000455661 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
PTPRE-204ENST00000455661 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
PTPRE-204ENST00000455661 MT3P25713 68 aa3.99□□□□□ -1.77
PTPRE-204ENST00000455661 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
PTPRE-204ENST00000455661 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
PTPRE-204ENST00000455661 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.77
PTPRE-204ENST00000455661 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
PTPRE-204ENST00000455661 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
PTPRE-204ENST00000455661 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
PTPRE-204ENST00000455661 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
PTPRE-204ENST00000455661 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
PTPRE-204ENST00000455661 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
PTPRE-204ENST00000455661 PRM1P04553 51 aa3.9□□□□□ -1.78
PTPRE-204ENST00000455661 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
PTPRE-204ENST00000455661 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
PTPRE-204ENST00000455661 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
PTPRE-204ENST00000455661 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
PTPRE-204ENST00000455661 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
PTPRE-204ENST00000455661 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
PTPRE-204ENST00000455661 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
PTPRE-204ENST00000455661 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
PTPRE-204ENST00000455661 SPRR2EP22531 72 aa3.49□□□□□ -1.85
PTPRE-204ENST00000455661 SPRR2BP35325 72 aa3.49□□□□□ -1.85
PTPRE-204ENST00000455661 SPRR2AP35326 72 aa3.49□□□□□ -1.85
PTPRE-204ENST00000455661 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
PTPRE-204ENST00000455661 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
PTPRE-204ENST00000455661 SPRR2DP22532 72 aa3.33□□□□□ -1.88
PTPRE-204ENST00000455661 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
PTPRE-204ENST00000455661 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
PTPRE-204ENST00000455661 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
PTPRE-204ENST00000455661 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
PTPRE-204ENST00000455661 MT4P47944 62 aa2.94□□□□□ -1.94
PTPRE-204ENST00000455661 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
PTPRE-204ENST00000455661 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
PTPRE-204ENST00000455661 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
PTPRE-204ENST00000455661 NEBP20929 6669 aa2.8□□□□□ -1.96
PTPRE-204ENST00000455661 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
PTPRE-204ENST00000455661 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
PTPRE-204ENST00000455661 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
PTPRE-204ENST00000455661 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
PTPRE-204ENST00000455661 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
PTPRE-204ENST00000455661 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
PTPRE-204ENST00000455661 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
PTPRE-204ENST00000455661 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
PTPRE-204ENST00000455661 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
PTPRE-204ENST00000455661 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PTPRE-204ENST00000455661 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
PTPRE-204ENST00000455661 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
PTPRE-204ENST00000455661 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
PTPRE-204ENST00000455661 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
PTPRE-204ENST00000455661 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PTPRE-204ENST00000455661 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
PTPRE-204ENST00000455661 PHGR1C9JFL3 82 aa1.9□□□□□ -2.1
PTPRE-204ENST00000455661 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
PTPRE-204ENST00000455661 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 194.5 ms