RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
PTPRA-208ENST00000455631 KRTAP4-12Q9BQ66 201 aa7.56□□□□□ -1.2
PTPRA-208ENST00000455631 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
PTPRA-208ENST00000455631 TNP1P09430 55 aa7.54□□□□□ -1.2
PTPRA-208ENST00000455631 SYNE1Q8NF91 8797 aaKnown RBP7.52□□□□□ -1.21
PTPRA-208ENST00000455631 SPANXA2-OT1Q8N9U9 137 aa7.52□□□□□ -1.21
PTPRA-208ENST00000455631 A0A1B0GU33 70 aa7.51□□□□□ -1.21
PTPRA-208ENST00000455631 SMIM20Q8N5G0 67 aa7.51□□□□□ -1.21
PTPRA-208ENST00000455631 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
PTPRA-208ENST00000455631 KRTAP4-11Q9BYQ6 195 aa7.45□□□□□ -1.22
PTPRA-208ENST00000455631 COA5Q86WW8 74 aa7.4□□□□□ -1.22
PTPRA-208ENST00000455631 KRTAP9-9Q9BYP9 154 aa7.34□□□□□ -1.23
PTPRA-208ENST00000455631 KRTAP9-4Q9BYQ2 154 aa7.34□□□□□ -1.23
PTPRA-208ENST00000455631 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
PTPRA-208ENST00000455631 AHNAKQ09666 5890 aaKnown RBP7.29□□□□□ -1.24
PTPRA-208ENST00000455631 ANAPC13Q9BS18 74 aa7.29□□□□□ -1.24
PTPRA-208ENST00000455631 MUC5ACP98088 5654 aa7.28□□□□□ -1.24
PTPRA-208ENST00000455631 A8MU10 97 aa7.28□□□□□ -1.24
PTPRA-208ENST00000455631 KRTAP5-8O75690 187 aa7.23□□□□□ -1.25
PTPRA-208ENST00000455631 MUC5BQ9HC84 5762 aaPredicted RBP7.18□□□□□ -1.26
PTPRA-208ENST00000455631 KRTAP5-2Q701N4 177 aa7.18□□□□□ -1.26
PTPRA-208ENST00000455631 A0A1B0GU69 56 aa7.05□□□□□ -1.28
PTPRA-208ENST00000455631 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
PTPRA-208ENST00000455631 RPS28P62857 69 aaKnown RBP7.03□□□□□ -1.28
PTPRA-208ENST00000455631 CCDC179H3BU77 68 aa7.02□□□□□ -1.29
PTPRA-208ENST00000455631 KRTAP6-1Q3LI64 71 aa6.96□□□□□ -1.3
PTPRA-208ENST00000455631 COX7CP15954 63 aa6.95□□□□□ -1.3
PTPRA-208ENST00000455631 OBSCNQ5VST9 7968 aa6.94□□□□□ -1.3
PTPRA-208ENST00000455631 MT1AP04731 61 aa6.94□□□□□ -1.3
PTPRA-208ENST00000455631 TMEM258P61165 79 aa6.91□□□□□ -1.3
PTPRA-208ENST00000455631 H3BS24 57 aa6.9□□□□□ -1.3
PTPRA-208ENST00000455631 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
PTPRA-208ENST00000455631 KRTAP6-2Q3LI66 62 aa6.8□□□□□ -1.32
PTPRA-208ENST00000455631 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
PTPRA-208ENST00000455631 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
PTPRA-208ENST00000455631 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
PTPRA-208ENST00000455631 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
PTPRA-208ENST00000455631 H7BZZ5 65 aa6.67□□□□□ -1.34
PTPRA-208ENST00000455631 KRTAP4-2Q9BYR5 136 aa6.64□□□□□ -1.35
PTPRA-208ENST00000455631 PRO0628Q9UI54 55 aa6.61□□□□□ -1.35
PTPRA-208ENST00000455631 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
PTPRA-208ENST00000455631 KRTAP5-1Q6L8H4 278 aa6.59□□□□□ -1.35
PTPRA-208ENST00000455631 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
PTPRA-208ENST00000455631 MT3P25713 68 aa6.38□□□□□ -1.39
PTPRA-208ENST00000455631 V9GYY9 64 aa6.38□□□□□ -1.39
PTPRA-208ENST00000455631 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
PTPRA-208ENST00000455631 UQCR11O14957 56 aa6.35□□□□□ -1.39
PTPRA-208ENST00000455631 Q1T7F1 81 aa6.33□□□□□ -1.4
PTPRA-208ENST00000455631 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
PTPRA-208ENST00000455631 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
PTPRA-208ENST00000455631 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
PTPRA-208ENST00000455631 K7ERS5 55 aa6.19□□□□□ -1.42
PTPRA-208ENST00000455631 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
PTPRA-208ENST00000455631 PSPHP1O15172 72 aa6.03□□□□□ -1.44
PTPRA-208ENST00000455631 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
PTPRA-208ENST00000455631 LCE1EQ5T753 118 aa6.01□□□□□ -1.45
PTPRA-208ENST00000455631 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
PTPRA-208ENST00000455631 A6NED7 52 aa5.93□□□□□ -1.46
PTPRA-208ENST00000455631 LCE1BQ5T7P3 118 aa5.8□□□□□ -1.48
PTPRA-208ENST00000455631 ROMO1P60602 79 aa5.59□□□□□ -1.51
PTPRA-208ENST00000455631 LCE1CQ5T751 118 aa5.59□□□□□ -1.51
PTPRA-208ENST00000455631 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
PTPRA-208ENST00000455631 KRTAP5-11Q6L8G4 156 aa5.23□□□□□ -1.57
PTPRA-208ENST00000455631 LCE1FQ5T754 118 aa5.16□□□□□ -1.58
PTPRA-208ENST00000455631 PHGR1C9JFL3 82 aa5.09□□□□□ -1.59
PTPRA-208ENST00000455631 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.98□□□□□ -1.61
PTPRA-208ENST00000455631 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
PTPRA-208ENST00000455631 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
PTPRA-208ENST00000455631 KRTAP21-2Q3LI59 83 aa4.57□□□□□ -1.68
PTPRA-208ENST00000455631 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
PTPRA-208ENST00000455631 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
PTPRA-208ENST00000455631 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
PTPRA-208ENST00000455631 MUC19Q7Z5P9 8384 aa4.32□□□□□ -1.72
PTPRA-208ENST00000455631 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
PTPRA-208ENST00000455631 INE1O15225 51 aa4.12□□□□□ -1.75
PTPRA-208ENST00000455631 KRTAP21-1Q3LI58 79 aa3.86□□□□□ -1.79
PTPRA-208ENST00000455631 MUC16Q8WXI7 14507 aa3.05□□□□□ -1.92
PTPRA-208ENST00000455631 PRM1P04553 51 aa2.84□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 113.4 ms