RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 UQCR11O14957 56 aa2.32□□□□□ -2.04
HMGB1P4-201ENST00000455362 MT2AP02795 61 aa2.31□□□□□ -2.04
HMGB1P4-201ENST00000455362 MT1FP04733 61 aa2.29□□□□□ -2.04
HMGB1P4-201ENST00000455362 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
HMGB1P4-201ENST00000455362 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
HMGB1P4-201ENST00000455362 M0QZ58 72 aa2.28□□□□□ -2.04
HMGB1P4-201ENST00000455362 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
HMGB1P4-201ENST00000455362 CRIPTQ9P021 101 aa2.28□□□□□ -2.04
HMGB1P4-201ENST00000455362 SPRR2GQ9BYE4 73 aa2.25□□□□□ -2.05
HMGB1P4-201ENST00000455362 A0A0D9SG42 100 aa2.23□□□□□ -2.05
HMGB1P4-201ENST00000455362 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
HMGB1P4-201ENST00000455362 USH2AO75445 5202 aa2.22□□□□□ -2.05
HMGB1P4-201ENST00000455362 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
HMGB1P4-201ENST00000455362 KRTAP19-8Q3LI54 63 aa2.2□□□□□ -2.06
HMGB1P4-201ENST00000455362 MT1BP07438 61 aa2.17□□□□□ -2.06
HMGB1P4-201ENST00000455362 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
HMGB1P4-201ENST00000455362 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
HMGB1P4-201ENST00000455362 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
HMGB1P4-201ENST00000455362 FSIP2Q5CZC0 6907 aa2.1□□□□□ -2.07
HMGB1P4-201ENST00000455362 MT1XP80297 61 aa2.09□□□□□ -2.07
HMGB1P4-201ENST00000455362 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
HMGB1P4-201ENST00000455362 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P4-201ENST00000455362 KRTAP19-6Q3LI70 58 aa2.06□□□□□ -2.08
HMGB1P4-201ENST00000455362 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
HMGB1P4-201ENST00000455362 TNP1P09430 55 aa2.02□□□□□ -2.09
HMGB1P4-201ENST00000455362 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
HMGB1P4-201ENST00000455362 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
HMGB1P4-201ENST00000455362 KMT2DO14686 5537 aa1.99□□□□□ -2.09
HMGB1P4-201ENST00000455362 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
HMGB1P4-201ENST00000455362 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
HMGB1P4-201ENST00000455362 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P4-201ENST00000455362 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
HMGB1P4-201ENST00000455362 SYNE2Q8WXH0 6885 aaKnown RBP1.89□□□□□ -2.11
HMGB1P4-201ENST00000455362 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
HMGB1P4-201ENST00000455362 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
HMGB1P4-201ENST00000455362 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
HMGB1P4-201ENST00000455362 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
HMGB1P4-201ENST00000455362 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
HMGB1P4-201ENST00000455362 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
HMGB1P4-201ENST00000455362 MT1EP04732 61 aa1.83□□□□□ -2.12
HMGB1P4-201ENST00000455362 SPRR2FQ96RM1 72 aa1.81□□□□□ -2.12
HMGB1P4-201ENST00000455362 MT1LQ93083 61 aa1.79□□□□□ -2.12
HMGB1P4-201ENST00000455362 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
HMGB1P4-201ENST00000455362 NEBP20929 6669 aa1.76□□□□□ -2.13
HMGB1P4-201ENST00000455362 MT1GP13640 62 aa1.75□□□□□ -2.13
HMGB1P4-201ENST00000455362 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
HMGB1P4-201ENST00000455362 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
HMGB1P4-201ENST00000455362 SPRR2EP22531 72 aa1.73□□□□□ -2.13
HMGB1P4-201ENST00000455362 SPRR2BP35325 72 aa1.73□□□□□ -2.13
HMGB1P4-201ENST00000455362 SPRR2AP35326 72 aa1.73□□□□□ -2.13
HMGB1P4-201ENST00000455362 MT1MQ8N339 61 aa1.73□□□□□ -2.13
HMGB1P4-201ENST00000455362 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
HMGB1P4-201ENST00000455362 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
HMGB1P4-201ENST00000455362 SPRR2DP22532 72 aa1.67□□□□□ -2.14
HMGB1P4-201ENST00000455362 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
HMGB1P4-201ENST00000455362 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
HMGB1P4-201ENST00000455362 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
HMGB1P4-201ENST00000455362 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
HMGB1P4-201ENST00000455362 MT1AP04731 61 aa1.52□□□□□ -2.17
HMGB1P4-201ENST00000455362 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
HMGB1P4-201ENST00000455362 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
HMGB1P4-201ENST00000455362 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
HMGB1P4-201ENST00000455362 MT4P47944 62 aa1.45□□□□□ -2.18
HMGB1P4-201ENST00000455362 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
HMGB1P4-201ENST00000455362 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
HMGB1P4-201ENST00000455362 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
HMGB1P4-201ENST00000455362 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
HMGB1P4-201ENST00000455362 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
HMGB1P4-201ENST00000455362 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
HMGB1P4-201ENST00000455362 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
HMGB1P4-201ENST00000455362 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
HMGB1P4-201ENST00000455362 PRM1P04553 51 aa1.21□□□□□ -2.22
HMGB1P4-201ENST00000455362 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P4-201ENST00000455362 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
HMGB1P4-201ENST00000455362 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
HMGB1P4-201ENST00000455362 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
HMGB1P4-201ENST00000455362 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 96.6 ms